Gene: Achn023851 (Actinidia chinensis)

Overview top

Gene Identifier
Achn023851
Transcript Identifier
Achn023851-TA
Gene Type
Coding gene
Location
Chr1 : 4876687-4887081 : positive

Family Information

Homologous gene family
HOM04D000338
(669 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D005534
(79 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Cullin 4; contains IPR001373 (Cullin, N-terminal), IPR011991 (Winged helix-turn-helix DNA-binding domain)

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0010100
IEA
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT5G46210
GO:0048575
IEA
PLAZA Integrative Orthologyshort-day photoperiodism, flowering AT5G46210
GO:0048366
IEA
PLAZA Integrative Orthologyleaf development AT5G46210
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT5G46210
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT5G46210
GO:0009755
IEA
PLAZA Integrative Orthologyhormone-mediated signaling pathway AT5G46210
GO:0048825
IEA
PLAZA Integrative Orthologycotyledon development AT5G46210
GO:0010182
IEA
PLAZA Integrative Orthologysugar mediated signaling pathway AT5G46210
GO:0000209
IEA
PLAZA Integrative Orthologyprotein polyubiquitination AT5G46210
GO:0009640
IEA
PLAZA Integrative Orthologyphotomorphogenesis AT5G46210
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair AT5G46210
GO:0010154
IEA
PLAZA Integrative Orthologyfruit development AT5G46210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
InterProubiquitin protein ligase binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT5G46210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031461
IEA
InterProcullin-RING ubiquitin ligase complex
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT5G46210
GO:0000151
IEA
PLAZA Integrative Orthologyubiquitin ligase complex AT5G46210
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT5G46210
GO:0080008
IEA
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT5G46210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR016157Cullin, conserved site
IPR016158Cullin homology
IPR016159Cullin repeat-like-containing domain

Mapman id Description
35.1not assigned.annotated