Gene: Achn017901 (Actinidia chinensis)

Overview top

Gene Identifier
Achn017901
Transcript Identifier
Achn017901-TA
Gene Type
Coding gene
Location
Chr13 : 2171227-2190985 : positive

Family Information

Homologous gene family
HOM04D002634
(126 genes in 55 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Serrate RNA effector molecule; contains IPR007042 (Arsenite-resistance protein 2), IPR021933 (Protein of unknown function DUF3546)

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010267
IEA
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT2G27100
GO:2000011
IEA
PLAZA Integrative Orthologyregulation of adaxial/abaxial pattern formation AT2G27100
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT2G27100
GO:0000381
IEA
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT2G27100
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G27100
GO:0031053
IEA
PLAZA Integrative Orthologyprimary miRNA processing AT2G27100
GO:0048509
IEA
PLAZA Integrative Orthologyregulation of meristem development AT2G27100
GO:0008380
IEA
PLAZA Integrative OrthologyRNA splicing AT2G27100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT2G27100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT2G27100
GO:0010445
IEA
PLAZA Integrative Orthologynuclear dicing body AT2G27100
GO:0005846
IEA
PLAZA Integrative Orthologynuclear cap binding complex AT2G27100
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT2G27100
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT2G27100
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus AT2G27100
GO:0016607
IEA
PLAZA Integrative Orthologynuclear speck AT2G27100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007042Arsenite-resistance protein 2
IPR021933Protein of unknown function DUF3546
IPR013087Zinc finger C2H2-type

Mapman id Description
15.5.15.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)
16.10.2.1.3.RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component SERRATE