Dicots PLAZA 4.5 gene overview : AUR62001318

Gene: AUR62001318 (Chenopodium quinoa)

Overview

Gene Identifier: AUR62001318
Transcript Identifier: AUR62001318-RA
Gene Type: Coding gene
Location: C_Quinoa_Scaffold_2716 : 3132012-3134608 : positive

Family Information

Homologous gene family: HOM04D000036
(2681 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001290
(215 genes in 49 species)
specific family

Duplication type: Block duplicate

Descriptions

Description: PRK4: Pollen receptor-like kinase 4

Identifiers

Type	Value
tid	AUR62001318-RA.v1.0
id	AUR62001318.v1.0
pacid	36313720

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	InterPro	protein phosphorylation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR001611	Leucine-rich repeat
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR011009	Protein kinase-like domain

Mapman id	Description
18.4.1.3	.Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-III)