Gene: ATR0594G193 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0594G193
Transcript Identifier
ATR0594G193.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00023 : 5333466-5385089 : negative

Family Information

Homologous gene family
HOM04D000554
(472 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D000546
(383 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00023.197
idevm_27.TU.AmTr_v1.0_scaffold00023.197.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00023.197
nameevm_27.model.AmTr_v1.0_scaffold00023.197
pacid31573828
tidevm_27.model.AmTr_v1.0_scaffold00023.197.v1.0

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
UniProtregulation of transcription, DNA-templated
GO:0006351
IEA
UniProttranscription, DNA-templated
GO:0048530
IEA
PLAZA Integrative Orthologyfruit morphogenesis AT1G01520
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT5G02840
GO:0010628
IEA
PLAZA Integrative Orthologypositive regulation of gene expression AT3G09600
GO:0031129
IEA
PLAZA Integrative Orthologyinductive cell-cell signaling AT1G01520
GO:0009739
IEA
PLAZA Integrative Orthologyresponse to gibberellin AT5G02840
GO:0048573
IEA
PLAZA Integrative Orthologyphotoperiodism, flowering AT3G09600
GO:0009965
IEA
PLAZA Integrative Orthologyleaf morphogenesis AT1G01520
GO:0009723
IEA
PLAZA Integrative Orthologyresponse to ethylene AT5G02840
GO:0007623
IEA
PLAZA Integrative Orthologycircadian rhythm AT5G02840
GO:0000226
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton organization AT1G01520
GO:0010091
IEA
PLAZA Integrative Orthologytrichome branching AT1G01520
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT5G02840
GO:2000039
IEA
PLAZA Integrative Orthologyregulation of trichome morphogenesis AT1G01520
GO:0048444
IEA
PLAZA Integrative Orthologyfloral organ morphogenesis AT1G01520
GO:0032922
IEA
PLAZA Integrative Orthologycircadian regulation of gene expression AT3G09600
GO:0009733
IEA
PLAZA Integrative Orthologyresponse to auxin AT5G02840
GO:0045604
IEA
PLAZA Integrative Orthologyregulation of epidermal cell differentiation AT1G01520
GO:0042753
IEA
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT3G09600
GO:0042752
IEA
PLAZA Integrative Orthologyregulation of circadian rhythm AT3G09600
GO:0009751
IEA
PLAZA Integrative Orthologyresponse to salicylic acid AT5G02840
GO:0009753
IEA
PLAZA Integrative Orthologyresponse to jasmonic acid AT5G02840
GO:0009651
IEA
PLAZA Integrative Orthologyresponse to salt stress AT5G02840
GO:0042814
IEA
PLAZA Integrative Orthologymonopolar cell growth AT1G01520
GO:0043966
IEA
PLAZA Integrative Orthologyhistone H3 acetylation AT3G09600
GO:0010482
IEA
PLAZA Integrative Orthologyregulation of epidermal cell division AT1G01520
GO:0008360
IEA
PLAZA Integrative Orthologyregulation of cell shape AT1G01520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
UniProtDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0042803
IEA
PLAZA Integrative Orthologyprotein homodimerization activity AT1G01520
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding AT1G01520
GO:0001190
IEA
PLAZA Integrative Orthologytranscriptional activator activity, RNA polymerase II transcription factor binding AT3G09600
GO:0043565
IEA
PLAZA Integrative Orthologysequence-specific DNA binding AT3G09600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
UniProtnucleus
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT1G01520
GO:0005802
IEA
PLAZA Integrative Orthologytrans-Golgi network AT1G01520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like
IPR006447Myb domain, plants

Mapman id Description
15.5.2.2.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)
27.1.6.2.Multi-process regulation.circadian clock system.evening element regulation.clock factor (REVEILLE)