Gene: ATR0564G060 (Amborella trichopoda)

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Gene Identifier
ATR0564G060
Transcript Identifier
ATR0564G060.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 2636892-2637485 : positive

Family Information

Homologous gene family
HOM04D000273
(787 genes in 50 species)
specific family
Orthologous gene family
ORTHO04D000206
(672 genes in 50 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.129
idevm_27.TU.AmTr_v1.0_scaffold00010.129.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.129
nameevm_27.model.AmTr_v1.0_scaffold00010.129
pacid31572679
tidevm_27.model.AmTr_v1.0_scaffold00010.129.v1.0

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009641
IEA
PLAZA Tree-based Orthologyshade avoidance AT4G25260
GO:0010214
IEA
PLAZA Tree-based Orthologyseed coat development AT2G47670
GO:0009567
IEA
PLAZA Tree-based Orthologydouble fertilization forming a zygote and endosperm AT4G00080
GO:0043086
IEA
PLAZA Tree-based Orthologynegative regulation of catalytic activity AT2G47670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046910
IEA
PLAZA Tree-based Orthologypectinesterase inhibitor activity AT2G47670
GO:0004857
IEA
InterProenzyme inhibitor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
PLAZA Tree-based Orthologyplasma membrane AT4G12390
GO:0005774
IEA
PLAZA Tree-based Orthologyvacuolar membrane AT4G12390
GO:0005794
IEA
PLAZA Tree-based OrthologyGolgi apparatus AT4G12390
GO:0016020
IEA
PLAZA Tree-based Orthologymembrane AT4G12390
GO:0005768
IEA
PLAZA Tree-based Orthologyendosome AT4G12390
GO:0009506
IEA
PLAZA Tree-based Orthologyplasmodesma AT4G12390
GO:0005802
IEA
PLAZA Tree-based Orthologytrans-Golgi network AT4G12390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006501Pectinesterase inhibitor domain

Mapman id Description
35.1not assigned.annotated