Gene: ATR0051G021 (Amborella trichopoda)

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Gene Identifier
ATR0051G021
Transcript Identifier
ATR0051G021.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00146 : 768545-774871 : negative

Family Information

Homologous gene family
HOM04D002539
(130 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D003070
(123 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00146.42
idevm_27.TU.AmTr_v1.0_scaffold00146.42.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00146.42
nameevm_27.model.AmTr_v1.0_scaffold00146.42
pacid31574897
tidevm_27.model.AmTr_v1.0_scaffold00146.42.v1.0

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006145Pseudouridine synthase, RsuA/RluB/C/D/E/F
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.4.RNA processing.tRNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)