Gene: AT5G56500 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G56500
Transcript Identifier
AT5G56500.1
Gene Type
Coding gene
Location
Chr5 : 22874058-22876966 : positive

Family Information

Homologous gene family
HOM04D000411
(593 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D001784
(173 genes in 55 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
TCP-1/cpn60 chaperonin family protein
Curated Summary
Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).
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Identifiers

Type Value
full_namechaperonin-60beta3
symbolCpn60beta3
tidAT5G56500.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006458
IBA
Gene Ontology'de novo' protein folding1
GO:0007005
IBA
Gene Ontologymitochondrion organization1
GO:0042026
IEA
Gene Ontologyprotein refolding2
GO:0042026
IEA
InterProprotein refolding
GO:0061077
IBA
Gene Ontologychaperone-mediated protein folding1
GO:0006457
IEA
InterProprotein folding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
Gene OntologyATP binding3
GO:0005524
IEA
InterProATP binding
GO:0044183
IBA
Gene Ontologyprotein binding involved in protein folding1
GO:0051082
IBA
Gene Ontologyunfolded protein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
ISM
Gene Ontologychloroplast4 5
GO:0005739
IDA
Gene Ontologymitochondrion6
GO:0009570
IDA
Gene Ontologychloroplast stroma7
GO:0016020
IDA
Gene Ontologymembrane8
GO:0005829
IDA
Gene Ontologycytosol9
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027413GroEL-like equatorial domain
IPR027409GroEL-like apical domain
IPR001844Chaperonin Cpn60
IPR002423Chaperonin Cpn60/TCP-1 family
IPR018370Chaperonin Cpn60, conserved site

Mapman id Description
1.1.8.1.6.2.2Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.Cpn60 chaperonin heterodimer.subunit beta
1.2.1.2.1.2Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.CPN60 assembly chaperone complex.component CPN60b
19.1.7.1.Protein homeostasis.protein quality control.Hsp60 chaperone system.chaperone (Hsp60)