Gene: AT5G47970 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G47970
Transcript Identifier
AT5G47970.1
Gene Type
Coding gene
Location
Chr5 : 19423420-19425585 : positive

Family Information

Homologous gene family
HOM04D003521
(95 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D004355
(92 genes in 55 species)
specific family

Descriptions

Description
Aldolase-type TIM barrel family protein
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Identifiers

Type Value
tidAT5G47970.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006808
ISS
Gene Ontologyregulation of nitrogen utilization1
GO:0055114
IEA
Gene Ontologyoxidation-reduction process2
GO:0055114
IEA
InterProoxidation-reduction process
GO:0008033
IEA
InterProtRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017150
IEA
Gene OntologytRNA dihydrouridine synthase activity3
GO:0017150
IEA
InterProtRNA dihydrouridine synthase activity
GO:0050660
IEA
Gene Ontologyflavin adenine dinucleotide binding3
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast4
GO:0005634
IDA
Gene Ontologynucleus5
GO:0005737
IDA
Gene Ontologycytoplasm5
GO:0009524
IDA
Gene Ontologyphragmoplast5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013785Aldolase-type TIM barrel
IPR001269tRNA-dihydrouridine synthase
IPR018517tRNA-dihydrouridine synthase, conserved site

Mapman id Description
16.6.4.1.RNA processing.tRNA modification.dihydrouridylation.tRNA dihydrouridine synthase