Gene: AT5G47370 (Arabidopsis thaliana)

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Gene Identifier
AT5G47370
Transcript Identifier
AT5G47370.1
Gene Type
Coding gene
Location
Chr5 : 19216482-19217647 : negative

Family Information

Homologous gene family
HOM04D000379
(630 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D000283
(584 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
Curated Summary
homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis.
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Identifiers

Type Value
symbolHAT2
tidAT5G47370.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
UniProttranscription, DNA-templated
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated1
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009733
IMP
UniProtresponse to auxin
GO:0009733
IMP
Gene Ontologyresponse to auxin3
GO:0009734
IEP
UniProtauxin-activated signaling pathway
GO:0009734
IEP
Gene Ontologyauxin-activated signaling pathway3
GO:0009826
IMP
UniProtunidimensional cell growth
GO:0009826
IMP
Gene Ontologyunidimensional cell growth3
GO:0045892
IMP
UniProtnegative regulation of transcription, DNA-templated
GO:0045892
IMP
Gene Ontologynegative regulation of transcription, DNA-templated3
GO:0009641
IEP
UniProtshade avoidance
GO:0009641
IEP
Gene Ontologyshade avoidance4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
UniProtsequence-specific DNA binding
GO:0043565
IEA
Gene Ontologysequence-specific DNA binding5
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
ISS
UniProttranscription factor activity, sequence-specific DNA binding
GO:0003700
ISS
Gene Ontologytranscription factor activity, sequence-specific DNA binding6
GO:0003700
IEA
InterProtranscription factor activity, sequence-specific DNA binding
GO:0003677
ISS
UniProtDNA binding
GO:0003677
ISS
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
UniProtnucleus
GO:0005634
ISS, ISM
IEA
Gene Ontologynucleus2 7 8
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006712HD-ZIP protein, N-terminal
IPR003106Leucine zipper, homeobox-associated
IPR001356Homeobox domain
IPR017970Homeobox, conserved site
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.1.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)