Gene: AT5G43990 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G43990
Transcript Identifier
AT5G43990.5
Gene Type
Coding gene
Location
Chr5 : 17698523-17701733 : positive

Family Information

Homologous gene family
HOM04D001622
(186 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
SET-domain containing protein lysine methyltransferase family protein
Curated Summary
Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.
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Identifiers

Type Value
symbolSUVR2
tidAT5G43990.5

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
Gene Ontologyhistone lysine methylation1
GO:0034968
IEA
InterProhistone lysine methylation
GO:0080188
IDA
UniProtRNA-directed DNA methylation
GO:0080188
IDA
Gene OntologyRNA-directed DNA methylation2 3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
UniProtzinc ion binding
GO:0008270
IEA
Gene Ontologyzinc ion binding1
GO:0008270
IEA
InterProzinc ion binding
GO:0018024
IEA
UniProthistone-lysine N-methyltransferase activity
GO:0018024
IEA
Gene Ontologyhistone-lysine N-methyltransferase activity1
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0005515
IPI
Gene Ontologyprotein binding2 3
GO:0005515
IEA
InterProprotein binding
GO:0042802
IEA
PLAZA Tree-based Orthologyidentical protein binding AT1G04050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IEA
UniProtnucleus
GO:0005634
IDA
ISM
IEA
Gene Ontologynucleus2 3 4 5
GO:0005634
IEA
InterPronucleus
GO:0005694
IDA
IEA
UniProtchromosome
GO:0005694
IDA
IEA
Gene Ontologychromosome2 3 5
GO:0005730
IDA
UniProtnucleolus
GO:0005730
IDA
Gene Ontologynucleolus6
GO:0009507
IDA
UniProtchloroplast
GO:0009507
IDA
Gene Ontologychloroplast7
GO:0009506
IEA
PLAZA Tree-based Orthologyplasmodesma AT3G04380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018848WIYLD domain
IPR007728Pre-SET domain
IPR001214SET domain
IPR025776Histone-lysine N-methyltransferase SUVR4/SUVR1/SUVR2

Mapman id Description
12.3.3.7.Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar)