Dicots PLAZA 4.5 gene overview : AT5G28670

Gene: AT5G28670 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G28670
Transcript Identifier: AT5G28670.1
Gene Type: Transposon
Location: Chr5 : 10691737-10695537 : negative

Family Information

No gene family defined for this gene.

Descriptions

Description: transposable_element_gene

Identifiers

Type	Value
tid	AT5G28670.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

No GO associations found for this gene.

No InterPro domains detected for this gene.

No MapMan annotations defined for this gene.