Gene: AT5G20680 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G20680
Transcript Identifier
AT5G20680.2
Gene Type
Coding gene
Location
Chr5 : 6999221-7001596 : positive

Family Information

Homologous gene family
HOM04D000049
(2385 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D001978
(163 genes in 53 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
TRICHOME BIREFRINGENCE-LIKE 16
Curated Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
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Identifiers

Type Value
symbolTBL16
tidAT5G20680.2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071554
IBA
UniProtcell wall organization or biogenesis
GO:0071554
IBA
Gene Ontologycell wall organization or biogenesis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016413
IBA
UniProtO-acetyltransferase activity
GO:0016413
IBA
Gene OntologyO-acetyltransferase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IDA
UniProtGolgi apparatus
GO:0005794
IDA
Gene OntologyGolgi apparatus2
GO:0005768
IDA
UniProtendosome
GO:0005768
IDA
Gene Ontologyendosome3
GO:0005802
IDA
UniProttrans-Golgi network
GO:0005802
IDA
Gene Ontologytrans-Golgi network3
GO:0016021
IEA
UniProtintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029962Trichome birefringence-like family
IPR029969Protein trichome birefringence-like 16
IPR026057PC-Esterase
IPR025846PMR5 N-terminal domain

Mapman id Description
35.1not assigned.annotated