Gene: AT5G18480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G18480
Transcript Identifier
AT5G18480.1
Gene Type
Coding gene
Location
Chr5 : 6131307-6133787 : negative

Family Information

Homologous gene family
HOM04D004227
(83 genes in 54 species)
specific family
Orthologous gene family
ORTHO04D005337
(81 genes in 54 species)
specific family

Descriptions

Description
plant glycogenin-like starch initiation protein 6
Curated Summary
Encodes an IPC (inositol phosphorylceramide) glucuronosyltransferase. Defects in transmission via the pollen are evident but the defect in transmission through the male gametophyte is not due to improper pollen development or inability of pollen tubes to germinate and grow.
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Identifiers

Type Value
AliasIPUT1,INOSITOL PHOSPHORYLCERAMIDE GLUCURONOSYLTRANSFERASE 1
symbolPGSIP6
tidAT5G18480.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
ISS
Gene Ontologybiosynthetic process1
GO:0016051
ISS
Gene Ontologycarbohydrate biosynthetic process1
GO:0046513
IMP
UniProtceramide biosynthetic process
GO:0046513
IMP
Gene Ontologyceramide biosynthetic process2 3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
ISS
Gene Ontologytransferase activity, transferring glycosyl groups1
GO:0016757
IEA
InterProtransferase activity, transferring glycosyl groups
GO:0016758
ISS
Gene Ontologytransferase activity, transferring hexosyl groups1
GO:0046872
IEA
UniProtmetal ion binding
GO:0046872
IEA
Gene Ontologymetal ion binding4
GO:0015020
IDA
UniProtglucuronosyltransferase activity
GO:0015020
IDA
Gene Ontologyglucuronosyltransferase activity2 3
GO:1990482
IDA
UniProtsphingolipid alpha-glucuronosyltransferase activity
GO:1990482
IDA
Gene Ontologysphingolipid alpha-glucuronosyltransferase activity2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
UniProtGolgi membrane
GO:0000139
IEA
Gene OntologyGolgi membrane5
GO:0005576
ISM
Gene Ontologyextracellular region6
GO:0016021
IEA
UniProtintegral component of membrane
GO:0016021
IEA
Gene Ontologyintegral component of membrane4
GO:0016020
IDA
UniProtmembrane
GO:0016020
IDA
Gene Ontologymembrane7
GO:0005794
IDA
UniProtGolgi apparatus
GO:0005794
IDA
Gene OntologyGolgi apparatus8
GO:0005768
IDA
UniProtendosome
GO:0005768
IDA
Gene Ontologyendosome9
GO:0005802
IDA
UniProttrans-Golgi network
GO:0005802
IDA
Gene Ontologytrans-Golgi network9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR002495Glycosyl transferase, family 8

Mapman id Description
5.4.13.2.Lipid metabolism.sphingolipid biosynthesis.glycosylinositol phosphorylceramide (GIPC) biosynthesis.inositol phosphorylceramide glucuronosyltransferase (IPUT1)