Gene: AT5G06700 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G06700
Transcript Identifier
AT5G06700.1
Gene Type
Coding gene
Location
Chr5 : 2063638-2065810 : positive

Family Information

Homologous gene family
HOM04D000049
(2385 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D000593
(359 genes in 51 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
trichome birefringence-like protein (DUF828)
Curated Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.
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Identifiers

Type Value
AliasTBR,TBR,TRICHOME BIREFRINGENCE
tidAT5G06700.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009834
IMP
Gene Ontologyplant-type secondary cell wall biogenesis1
GO:0030244
IMP
Gene Ontologycellulose biosynthetic process1
GO:0009827
IMP
Gene Ontologyplant-type cell wall modification2
GO:0045489
IMP
Gene Ontologypectin biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016413
IBA
Gene OntologyO-acetyltransferase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus4
GO:0016021
IEA
Gene Ontologyintegral component of membrane5
GO:0005768
IDA
Gene Ontologyendosome6
GO:0005794
IDA
Gene OntologyGolgi apparatus6
GO:0005802
IDA
Gene Ontologytrans-Golgi network6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029962Trichome birefringence-like family
IPR029989Trichome birefringence/trichome birefringence-like 1
IPR026057PC-Esterase
IPR025846PMR5 N-terminal domain

Mapman id Description
35.1not assigned.annotated