Dicots PLAZA 4.5 gene overview : AT4G27090

Gene: AT4G27090 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G27090
Transcript Identifier: AT4G27090.1
Gene Type: Coding gene
Location: Chr4 : 13594104-13595187 : negative

Family Information

Homologous gene family: HOM04D001726
(179 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001964
(163 genes in 55 species)
specific family

Descriptions

Description: Ribosomal protein L14

Identifiers

Type	Value
tid	AT4G27090.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006412	ISS IEA	Gene Ontology	translation	1 2
GO:0006412	IEA	InterPro	translation
GO:0042254	ISS	Gene Ontology	ribosome biogenesis	1

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003735	ISS	Gene Ontology	structural constituent of ribosome	1
GO:0003735	IEA	InterPro	structural constituent of ribosome
GO:0003729	IDA	Gene Ontology	mRNA binding	3 4

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISM	Gene Ontology	cytoplasm	5
GO:0005840	ISS	Gene Ontology	ribosome	1
GO:0005840	IEA	InterPro	ribosome
GO:0009507	IDA	Gene Ontology	chloroplast	6
GO:0005773	IDA	Gene Ontology	vacuole	7
GO:0005730	IDA	Gene Ontology	nucleolus	8
GO:0022626	IDA	Gene Ontology	cytosolic ribosome	9
GO:0005783	IDA	Gene Ontology	endoplasmic reticulum	10
GO:0005774	IDA	Gene Ontology	vacuolar membrane	11
GO:0022625	IDA	Gene Ontology	cytosolic large ribosomal subunit	12
GO:0005829	IDA	Gene Ontology	cytosol	13
GO:0009506	IDA	Gene Ontology	plasmodesma	14
GO:0005794	RCA	Gene Ontology	Golgi apparatus	15
GO:0005622	IEA	InterPro	intracellular

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014722	Ribosomal protein L2 domain 2
IPR002784	Ribosomal protein L14e domain
IPR008991	Translation protein SH3-like domain

Mapman id	Description
17.1.2.1.15	.Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL14