Gene: AT4G20830 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G20830
Transcript Identifier
AT4G20830.1
Gene Type
Coding gene
Location
Chr4 : 11155486-11157577 : positive

Family Information

Homologous gene family
HOM04D000120
(1440 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D000053
(1309 genes in 53 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
FAD-binding Berberine family protein
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Identifiers

Type Value
tidAT4G20830.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055114
IEA
Gene Ontologyoxidation-reduction process1
GO:0055114
IEA
InterProoxidation-reduction process
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009055
ISS
Gene Ontologyelectron carrier activity3
GO:0016614
IEA
Gene Ontologyoxidoreductase activity, acting on CH-OH group of donors4
GO:0016614
IEA
InterProoxidoreductase activity, acting on CH-OH group of donors
GO:0050660
IEA
Gene Ontologyflavin adenine dinucleotide binding4
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003824
IEA
InterProcatalytic activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast5
GO:0031225
IEA
Gene Ontologyanchored component of membrane1
GO:0005886
IDA
Gene Ontologyplasma membrane6
GO:0005773
IDA
Gene Ontologyvacuole7
GO:0005739
IDA
Gene Ontologymitochondrion8
GO:0009505
IDA
Gene Ontologyplant-type cell wall9
GO:0048046
IDA
Gene Ontologyapoplast10
GO:0005829
IDA
Gene Ontologycytosol11
GO:0009506
IDA
Gene Ontologyplasmodesma12

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR016167FAD-binding, type 2, subdomain 1
IPR012951Berberine/berberine-like
IPR006094FAD linked oxidase, N-terminal
IPR016166FAD-binding, type 2

Mapman id Description
50.1.1.Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor