Gene: AT4G12390 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G12390
Transcript Identifier
AT4G12390.1
Gene Type
Coding gene
Location
Chr4 : 7336553-7337173 : positive

Family Information

Homologous gene family
HOM04D000273
(787 genes in 50 species)
specific family
Orthologous gene family
ORTHO04D000206
(672 genes in 50 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
pectin methylesterase inhibitor 1
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Identifiers

Type Value
symbolPME1
tidAT4G12390.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
UniProtcell wall modification
GO:0045490
IEA
UniProtpectin catabolic process
GO:0009641
IEA
PLAZA Tree-based Orthologyshade avoidance AT4G25260
GO:0010214
IEA
PLAZA Tree-based Orthologyseed coat development AT2G47670
GO:0009567
IEA
PLAZA Tree-based Orthologydouble fertilization forming a zygote and endosperm AT4G00080
GO:0043086
IEA
PLAZA Tree-based Orthologynegative regulation of catalytic activity AT2G47670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004857
IBA
UniProtenzyme inhibitor activity
GO:0004857
IBA
Gene Ontologyenzyme inhibitor activity1
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0046910
IBA
UniProtpectinesterase inhibitor activity
GO:0046910
ISS
Gene Ontologypectinesterase inhibitor activity2
GO:0045330
IEA
UniProtaspartyl esterase activity
GO:0030599
ISS
UniProtpectinesterase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISS
UniProtextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region3
GO:0005634
ISM
Gene Ontologynucleus3
GO:0005774
IDA
UniProtvacuolar membrane
GO:0005774
IDA
Gene Ontologyvacuolar membrane4
GO:0005886
IDA
UniProtplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane5
GO:0016020
IDA
UniProtmembrane
GO:0016020
IDA
Gene Ontologymembrane6
GO:0009506
IDA
UniProtplasmodesma
GO:0009506
IDA
Gene Ontologyplasmodesma7
GO:0005618
IEA
UniProtcell wall
GO:0005768
IDA
UniProtendosome
GO:0005794
IDA
UniProtGolgi apparatus
GO:0000139
IEA
UniProtGolgi membrane
GO:0005802
IDA
UniProttrans-Golgi network

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006501Pectinesterase inhibitor domain

Mapman id Description
35.1not assigned.annotated