Dicots PLAZA 4.5 gene overview : AT3G45130

Gene: AT3G45130 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G45130
Transcript Identifier: AT3G45130.2
Gene Type: Coding gene
Location: Chr3 : 16512170-16517522 : negative

Family Information

Homologous gene family: HOM04D000278
(779 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D000279
(588 genes in 55 species)
specific family

Descriptions

Description: lanosterol synthase 1

Identifiers

Type	Value
symbol	LAS1
tid	AT3G45130.2

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0019745	ISS	Gene Ontology	pentacyclic triterpenoid biosynthetic process	1

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016866	IEA	UniProt	intramolecular transferase activity
GO:0016866	IEA	Gene Ontology	intramolecular transferase activity	2
GO:0016866	IEA	InterPro	intramolecular transferase activity
GO:0000250	IDA	UniProt	lanosterol synthase activity
GO:0000250	IDA	Gene Ontology	lanosterol synthase activity	3

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISM	Gene Ontology	nucleus	4

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR018333	Squalene cyclase
IPR032697	Squalene cyclase, N-terminal
IPR032696	Squalene cyclase, C-terminal
IPR002365	Terpene synthase, conserved site
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid

Mapman id	Description
9.1.4.3	.Secondary metabolism.terpenoids.terpene biosynthesis.triterpenoid synthase