Gene: AT3G28480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G28480
Transcript Identifier
AT3G28480.1
Gene Type
Coding gene
Location
Chr3 : 10676266-10678262 : negative

Family Information

Homologous gene family
HOM04D000365
(640 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D001885
(168 genes in 55 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Oxoglutarate/iron-dependent oxygenase
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Identifiers

Type Value
tidAT3G28480.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018401
ISS
Gene Ontologypeptidyl-proline hydroxylation to 4-hydroxy-L-proline1
GO:0055114
IEA
Gene Ontologyoxidation-reduction process2
GO:0055114
IEA
InterProoxidation-reduction process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004656
IEA
Gene Ontologyprocollagen-proline 4-dioxygenase activity3
GO:0005506
IEA
Gene Ontologyiron ion binding4
GO:0005506
IEA
InterProiron ion binding
GO:0016705
IEA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706
ISS
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1
GO:0031418
IEA
Gene OntologyL-ascorbic acid binding4
GO:0031418
IEA
InterProL-ascorbic acid binding
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region5
GO:0005789
IEA
Gene Ontologyendoplasmic reticulum membrane6
GO:0016021
IEA
Gene Ontologyintegral component of membrane2
GO:0005794
IDA
Gene OntologyGolgi apparatus7
GO:0005774
IDA
Gene Ontologyvacuolar membrane8
GO:0005768
IDA
Gene Ontologyendosome9
GO:0005802
IDA
Gene Ontologytrans-Golgi network9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003582ShKT domain
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR006620Prolyl 4-hydroxylase, alpha subunit

Mapman id Description
18.9.1.Protein modification.hydroxylation.prolyl hydroxylase