Gene: AT3G10230 (Arabidopsis thaliana)

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Gene Identifier
AT3G10230
Transcript Identifier
AT3G10230.1
Gene Type
Coding gene
Location
Chr3 : 3164340-3165845 : negative

Family Information

Homologous gene family
HOM04D001511
(201 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D003304
(115 genes in 55 species)
specific family

Descriptions

Description
lycopene cyclase
Curated Summary
Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.
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Identifiers

Type Value
AliasAtLCY
symbolLYC
tidAT3G10230.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
IEA
UniProtcarotenoid biosynthetic process
GO:0016117
IEA
Gene Ontologycarotenoid biosynthetic process1
GO:0016117
IEA
InterProcarotenoid biosynthetic process
GO:0055114
IEA
Gene Ontologyoxidation-reduction process2
GO:0055114
IEA
InterProoxidation-reduction process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016705
IEA
UniProtoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0045436
IDA
UniProtlycopene beta cyclase activity
GO:0045436
IDA
Gene Ontologylycopene beta cyclase activity3 4
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion5
GO:0009507
IEA
UniProtchloroplast
GO:0009507
ISM
TAS, IEA
Gene Ontologychloroplast5 6 7

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Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023753FAD/NAD(P)-binding domain
IPR010108Lycopene cyclase, beta/epsilon

Mapman id Description
9.1.6.1.6.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene beta cyclase (LCY-b)