Dicots PLAZA 4.5 gene overview : AT2G17220

Gene: AT2G17220 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G17220
Transcript Identifier: AT2G17220.1
Gene Type: Coding gene
Location: Chr2 : 7487866-7489768 : negative

Family Information

Homologous gene family: HOM04D000059
(2212 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000042
(1376 genes in 53 species)
specific family

Duplication type: Block duplicate

Descriptions

Description: Protein kinase superfamily protein

Curated Summary: Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated.

Identifiers

Type	Value
full_name	kinase 3
symbol	Kin3
tid	AT2G17220.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IBA	Gene Ontology	protein phosphorylation	1
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0006952	IEA	Gene Ontology	defense response	2
GO:0007166	IBA	Gene Ontology	cell surface receptor signaling pathway	1

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004675	IBA	Gene Ontology	transmembrane receptor protein serine/threonine kinase activity	1
GO:0005524	IEA	Gene Ontology	ATP binding	2
GO:0005524	IEA	InterPro	ATP binding
GO:0016301	ISS	Gene Ontology	kinase activity	3
GO:0004672	IEA	InterPro	protein kinase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	Gene Ontology	nucleus	4
GO:0009507	IDA ISM	Gene Ontology	chloroplast	5 6
GO:0005886	IDA	Gene Ontology	plasma membrane	6

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR017441	Protein kinase, ATP binding site
IPR008271	Serine/threonine-protein kinase, active site
IPR000719	Protein kinase domain
IPR011009	Protein kinase-like domain

Mapman id	Description
18.4.1.37.1	.Protein modification.phosphorylation.TKL protein kinase superfamily.RLCK-VII receptor-like protein kinase families.receptor-like protein kinase (RLCK-VIIa)