Gene: AT1G78600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G78600
Transcript Identifier
AT1G78600.1
Gene Type
Coding gene
Location
Chr1 : 29567370-29568662 : positive

Family Information

Homologous gene family
HOM04D000574
(460 genes in 54 species)
specific family
Orthologous gene family
ORTHO04D000638
(339 genes in 54 species)
specific family

Descriptions

Description
light-regulated zinc finger protein 1
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Identifiers

Type Value
AliasBBX22,B-box domain protein 22,DBB3,DOUBLE B-BOX 3,STH3,SALT TOLERANCE HOMOLOG 3
symbolLZF1
tidAT1G78600.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
UniProttranscription, DNA-templated
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated1
GO:0006355
TAS, IEA
UniProtregulation of transcription, DNA-templated
GO:0006355
TAS, IEA
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0009658
IMP
UniProtchloroplast organization
GO:0009658
IMP
Gene Ontologychloroplast organization3
GO:0009718
IMP
UniProtanthocyanin-containing compound biosynthetic process
GO:0009718
IMP
Gene Ontologyanthocyanin-containing compound biosynthetic process3
GO:0015995
IMP
UniProtchlorophyll biosynthetic process
GO:0015995
IMP
Gene Ontologychlorophyll biosynthetic process3
GO:0010099
IGI
Gene Ontologyregulation of photomorphogenesis4
GO:0009641
IMP
UniProtshade avoidance
GO:0009641
IMP, IGI
Gene Ontologyshade avoidance5 6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000989
IBA
UniProttranscription factor activity, transcription factor binding
GO:0000989
IBA
Gene Ontologytranscription factor activity, transcription factor binding7
GO:0008270
IEA
UniProtzinc ion binding
GO:0008270
ISS
IEA
Gene Ontologyzinc ion binding8 9
GO:0008270
IEA
InterProzinc ion binding
GO:0003700
ISS
UniProttranscription factor activity, sequence-specific DNA binding
GO:0003700
ISS
Gene Ontologytranscription factor activity, sequence-specific DNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0043565
IPI
UniProtsequence-specific DNA binding
GO:0043565
IPI
Gene Ontologysequence-specific DNA binding10 11

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
UniProtnucleus
GO:0005634
ISM
IEA
Gene Ontologynucleus12 13
GO:0016607
IDA
UniProtnuclear speck
GO:0016607
IDA
Gene Ontologynuclear speck4
GO:0005622
IEA
InterProintracellular

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000315B-box-type zinc finger

Mapman id Description
15.5.1.1.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB)