Dicots PLAZA 4.5 gene overview : AT1G50890

Gene: AT1G50890 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G50890
Transcript Identifier: AT1G50890.1
Gene Type: Coding gene
Location: Chr1 : 18862295-18865752 : negative

Family Information

Homologous gene family: HOM04D000876
(320 genes in 55 species)
specific family

Descriptions

Description: ARM repeat superfamily protein

Identifiers

Type	Value
tid	AT1G50890.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008150	ND	Gene Ontology	biological_process	1

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008017	IEA	InterPro	microtubule binding
GO:0005488	IEA	InterPro	binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISM	Gene Ontology	chloroplast	2
GO:0005874	IEA	InterPro	microtubule

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011989	Armadillo-like helical
IPR033337	MT-associated protein TORTIFOLIA1/SPIRAL2-like
IPR016024	Armadillo-type fold

Mapman id	Description
20.1.5.3	.Cytoskeleton organisation.microtubular network.microtubule dynamics.microtubule growth pause state regulator (SPR2)