Dicots PLAZA 4.5 gene overview : AT1G15310

Gene: AT1G15310 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G15310
Transcript Identifier: AT1G15310.1
Gene Type: Coding gene
Location: Chr1 : 5269173-5271947 : negative

Family Information

Homologous gene family: HOM04D000952
(294 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D002512
(140 genes in 55 species)
specific family

Descriptions

Description: signal recognition particle 54 kDa subunit

Curated Summary: 54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins

Identifiers

Type	Value
Alias	SRP54-1,SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT
symbol	ATHSRP54A
tid	AT1G15310.1

Toolbox

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...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006614	IEA	Gene Ontology	SRP-dependent cotranslational protein targeting to membrane	1
GO:0006614	IEA	InterPro	SRP-dependent cotranslational protein targeting to membrane
GO:0006617	ISS	Gene Ontology	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003729	ISS	Gene Ontology	mRNA binding	2
GO:0003924	IEA	Gene Ontology	GTPase activity	1
GO:0003924	IEA	InterPro	GTPase activity
GO:0005525	ISS IEA	Gene Ontology	GTP binding	2 3
GO:0005525	IEA	InterPro	GTP binding
GO:0008312	ISS IEA	Gene Ontology	7S RNA binding	1 2
GO:0008312	IEA	InterPro	7S RNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISS, ISM	Gene Ontology	cytoplasm	4 5
GO:0005786	ISS	Gene Ontology	signal recognition particle, endoplasmic reticulum targeting	2
GO:0048500	IEA	InterPro	signal recognition particle

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR004125	Signal recognition particle, SRP54 subunit, M-domain
IPR022941	Signal recognition particle, SRP54 subunit
IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain
IPR013822	Signal recognition particle, SRP54 subunit, helical bundle
IPR003593	AAA+ ATPase domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
23.3.1.1.5	.Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54