Dicots PLAZA 4.5 gene overview : AH022242

Gene: AH022242 (Amaranthus hypochondriacus)

Overview

Gene Identifier: AH022242
Transcript Identifier: AH022242-RA
Gene Type: Coding gene
Location: Scaffold_15 : 5230357-5246126 : positive

Family Information

Homologous gene family: HOM04D000036
(2681 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001290
(215 genes in 49 species)
specific family

Descriptions

Description: Similar to PRK1: Pollen receptor-like kinase 1 (Arabidopsis thaliana)

Identifiers

Type	Value
tid	AH022242-RA.v2.1
pacid	38164209
id	AH022242.v2.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	InterPro	protein phosphorylation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR001611	Leucine-rich repeat
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR000719	Protein kinase domain
IPR011009	Protein kinase-like domain

No MapMan annotations defined for this gene.