Gene: AH020658 (Amaranthus hypochondriacus)

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Gene Identifier
AH020658
Transcript Identifier
AH020658-RA
Gene Type
Coding gene
Location
Scaffold_14 : 1789923-1792567 : positive

Family Information

Homologous gene family
HOM04D000163
(1234 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D000103
(969 genes in 53 species)
specific family

Descriptions

Description
Similar to SGR5: Protein SHOOT GRAVITROPISM 5 (Arabidopsis thaliana)

Identifiers

Type Value
tidAH020658-RA.v2.1
pacid38166116
idAH020658.v2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010601
IEA
PLAZA Integrative Orthologypositive regulation of auxin biosynthetic process AT1G68130
GO:2000012
IEA
PLAZA Integrative Orthologyregulation of auxin polar transport AT1G68130
GO:0048444
IEA
PLAZA Integrative Orthologyfloral organ morphogenesis AT1G68130
GO:0009958
IEA
PLAZA Integrative Orthologypositive gravitropism AT2G01940
GO:0009959
IEA
PLAZA Integrative Orthologynegative gravitropism AT2G01940
GO:2000904
IEA
PLAZA Integrative Orthologyregulation of starch metabolic process AT1G68130
GO:0009965
IEA
PLAZA Integrative Orthologyleaf morphogenesis AT1G68130
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G68130
GO:0009630
IEA
PLAZA Integrative Orthologygravitropism AT1G68130
GO:0010031
IEA
PLAZA Integrative Orthologycircumnutation AT2G01940
GO:0009590
IEA
PLAZA Integrative Orthologydetection of gravity AT2G01940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046982
IEA
PLAZA Integrative Orthologyprotein heterodimerization activity AT1G68130
GO:0003700
IEA
PLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA binding AT1G68130
GO:0043621
IEA
PLAZA Integrative Orthologyprotein self-association AT1G68130
GO:0044212
IEA
PLAZA Integrative Orthologytranscription regulatory region DNA binding AT1G68130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT1G68130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR013087Zinc finger C2H2-type
IPR019786Zinc finger, PHD-type, conserved site

No MapMan annotations defined for this gene.