Gene: AH020071 (Amaranthus hypochondriacus)

Overview top

Gene Identifier
AH020071
Transcript Identifier
AH020071-RA
Gene Type
Coding gene
Location
Scaffold_13 : 15365952-15383807 : negative

Family Information

Homologous gene family
HOM04D000411
(593 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D001784
(173 genes in 55 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic (Pisum sativum)

Identifiers

Type Value
tidAH020071-RA.v2.1
pacid38173498
idAH020071.v2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006457
IEA
InterProprotein folding
GO:0009627
IEA
PLAZA Integrative Orthologysystemic acquired resistance AT1G55490
GO:0008219
IEA
PLAZA Integrative Orthologycell death AT1G55490
GO:0009409
IEA
PLAZA Integrative Orthologyresponse to cold AT1G55490
GO:0042026
IEA
PLAZA Homology (enrichment)protein refolding HOM04D000411
GO:0051085
IEA
PLAZA Integrative Orthologychaperone mediated protein folding requiring cofactor AT1G55490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G55490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT5G56500
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion AT5G56500
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT1G55490
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT1G55490
GO:0010319
IEA
PLAZA Integrative Orthologystromule AT1G55490
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT1G55490
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT1G55490
GO:0009941
IEA
PLAZA Integrative Orthologychloroplast envelope AT1G55490
GO:0022626
IEA
PLAZA Integrative Orthologycytosolic ribosome AT1G55490
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT1G55490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027413GroEL-like equatorial domain
IPR027409GroEL-like apical domain
IPR002423Chaperonin Cpn60/TCP-1 family
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)
IPR018370Chaperonin Cpn60, conserved site

No MapMan annotations defined for this gene.