Gene: AH020040 (Amaranthus hypochondriacus)

Overview top

Gene Identifier
AH020040
Transcript Identifier
AH020040-RA
Gene Type
Coding gene
Location
Scaffold_13 : 15096575-15102714 : positive

Family Information

Homologous gene family
HOM04D000436
(564 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D000406
(455 genes in 55 species)
specific family

Descriptions

Description
Similar to CYSK: Cysteine synthase, chloroplastic/chromoplastic (Spinacia oleracea)

Identifiers

Type Value
tidAH020040-RA.v2.1
pacid38173208
idAH020040.v2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006535
IEA
InterProcysteine biosynthetic process from serine
GO:0019344
IEA
PLAZA Integrative Orthologycysteine biosynthetic process AT5G28020
GO:0048868
IEA
PLAZA Integrative Orthologypollen tube development AT3G59760
GO:0009735
IEA
PLAZA Integrative Orthologyresponse to cytokinin AT2G43750
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT2G43750
GO:0009567
IEA
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT3G59760
GO:0080145
IEA
PLAZA Integrative Orthologycysteine homeostasis AT5G28030
GO:0009860
IEA
PLAZA Integrative Orthologypollen tube growth AT3G59760
GO:0010043
IEA
PLAZA Integrative Orthologyresponse to zinc ion AT3G22460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004124
IEA
InterProcysteine synthase activity
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT3G59760
GO:0005524
IEA
PLAZA Integrative OrthologyATP binding AT3G59760
GO:0080146
IEA
PLAZA Integrative OrthologyL-cysteine desulfhydrase activity AT5G28030
GO:0008270
IEA
PLAZA Integrative Orthologyzinc ion binding AT3G59760
GO:0030170
IEA
PLAZA Integrative Orthologypyridoxal phosphate binding AT5G28030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT2G43750
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion AT3G59760
GO:0005768
IEA
PLAZA Integrative Orthologyendosome AT2G43750
GO:0005802
IEA
PLAZA Integrative Orthologytrans-Golgi network AT2G43750
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT3G59760
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT2G43750
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus AT2G43750
GO:0009941
IEA
PLAZA Integrative Orthologychloroplast envelope AT2G43750
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT3G59760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR001216Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
IPR005856Cysteine synthase
IPR005859Cysteine synthase CysK

No MapMan annotations defined for this gene.