Dicots PLAZA 4.5 gene overview : AH017070

Gene: AH017070 (Amaranthus hypochondriacus)

Overview

Gene Identifier: AH017070
Transcript Identifier: AH017070-RA
Gene Type: Coding gene
Location: Scaffold_11 : 11914015-11916418 : negative

Family Information

Homologous gene family: HOM04D000170
(1155 genes in 53 species)
specific family
Orthologous gene family: ORTHO04D000207
(670 genes in 52 species)
specific family

Duplication type: Tandem duplicate

Descriptions

Description: Protein of unknown function

Identifiers

Type	Value
tid	AH017070-RA.v2.1
pacid	38168621
id	AH017070.v2.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006950	IEA	InterPro	response to stress
GO:0006468	IEA	PLAZA Homology (enrichment)	protein phosphorylation	HOM04D000170

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	PLAZA Homology (enrichment)	ATP binding	HOM04D000170
GO:0004672	IEA	PLAZA Homology (enrichment)	protein kinase activity	HOM04D000170

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR006016	UspA

No MapMan annotations defined for this gene.