Gene: AH012698 (Amaranthus hypochondriacus)

Overview top

Gene Identifier
AH012698
Transcript Identifier
AH012698-RA
Gene Type
Coding gene
Location
Scaffold_8 : 2633296-2640311 : positive

Family Information

Homologous gene family
HOM04D000254
(847 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D004343
(92 genes in 55 species)
specific family

Descriptions

Description
Similar to RH38: DEAD-box ATP-dependent RNA helicase 38 (Arabidopsis thaliana)

Identifiers

Type Value
tidAH012698-RA.v2.1
pacid38174686
idAH012698.v2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IEA
PLAZA Integrative Orthologyresponse to cold AT3G53110
GO:0009408
IEA
PLAZA Integrative Orthologyresponse to heat AT3G53110
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT3G53110
GO:0016973
IEA
PLAZA Integrative Orthologypoly(A)+ mRNA export from nucleus AT3G53110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0008186
IEA
PLAZA Integrative OrthologyRNA-dependent ATPase activity AT3G53110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
IEA
PLAZA Integrative Orthologynuclear envelope AT3G53110
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT3G53110
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT3G53110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR014014RNA helicase, DEAD-box type, Q motif
IPR027417P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.