Gene: AH003477 (Amaranthus hypochondriacus)

Overview top

Gene Identifier
AH003477
Transcript Identifier
AH003477-RA
Gene Type
Coding gene
Location
Scaffold_2 : 18434146-18437250 : negative

Family Information

Homologous gene family
HOM04D000937
(298 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D001080
(239 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Similar to PHYA: Phytochrome A (Solanum tuberosum)

Identifiers

Type Value
tidAH003477-RA.v2.1
pacid38181986
idAH003477.v2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007165
IEA
InterProsignal transduction
GO:0009584
IEA
InterProdetection of visible light
GO:0017006
IEA
PLAZA Homology (enrichment)protein-tetrapyrrole linkage HOM04D000937
GO:0018298
IEA
PLAZA Homology (enrichment)protein-chromophore linkage HOM04D000937
GO:0009585
IEA
PLAZA Homology (enrichment)red, far-red light phototransduction HOM04D000937

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
IEA
InterProphosphorelay sensor kinase activity
GO:0009881
IEA
PLAZA Homology (enrichment)photoreceptor activity HOM04D000937
GO:0042803
IEA
PLAZA Homology (enrichment)protein homodimerization activity HOM04D000937
GO:0005515
IEA
PLAZA Homology (enrichment)protein binding HOM04D000937

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000014PAS domain
IPR003594Histidine kinase-like ATPase, C-terminal domain
IPR013767PAS fold
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR001294Phytochrome
IPR005467Histidine kinase domain

No MapMan annotations defined for this gene.