Dicots PLAZA 4.5 gene overview : AH000069

Gene: AH000069 (Amaranthus hypochondriacus)

Overview

Gene Identifier: AH000069
Transcript Identifier: AH000069-RA
Gene Type: Coding gene
Location: Scaffold_1 : 725641-728075 : negative

Family Information

Homologous gene family: HOM04D000242
(871 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D000255
(614 genes in 54 species)
specific family

Duplication type: Tandem duplicate

Descriptions

Description: Similar to AKR1: Probable aldo-keto reductase 1 (Glycine max)

Identifiers

Type	Value
tid	AH000069-RA.v2.1
pacid	38183874
id	AH000069.v2.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016491	IEA	InterPro	oxidoreductase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR023210	NADP-dependent oxidoreductase domain
IPR020471	Aldo/keto reductase

No MapMan annotations defined for this gene.