Anchorpoints

Gene id
Cucsa.352820
Organism
Cucumis sativus L.

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn012811Mitochondrial outer membrane protein porin; contains IPR023614 (Porin domain), IPR027246 (Eukaryotic porin/Tom40)Chr9-View
Achn364131Mitochondrial outer membrane protein porin; contains IPR023614 (Porin domain), IPR027246 (Eukaryotic porin/Tom40)Chr5+View
Achn088541Porin/voltage-dependent anion-selective channel protein; contains IPR023614 (Porin domain), IPR027246 (Eukaryotic porin/Tom40)Unknow-View

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH003870Similar to VDAC2: Mitochondrial outer membrane protein porin 2 (Arabidopsis thaliana)Scaffold_2-View
AH005704Similar to VDAC2: Mitochondrial outer membrane protein porin 2 (Arabidopsis thaliana)Scaffold_3+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.37K80PREDICTED: mitochondrial outer membrane protein porin 1-like [Glycine max]Araip.B06-View
Araip.V2UYEPREDICTED: mitochondrial outer membrane protein porin 1-like [Glycine max]Araip.B05-View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G43800No description available.scaffold_8-View
AL5G29930No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G67500voltage dependent anion channel 2 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1%2C AT5G67500/VDAC2%2C AT5G15090/VDAC3%2C AT5G57490/VDAC4%2C AT5G15090/VDAC5). VDACs are reported to be porin-type%2C beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. voltage dependent anion channel 2 (VDAC2)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: response to bacterium%2C anion transport%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 5 (TAIR:AT3G49920.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
AT3G49920voltage dependent anion channel 5 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1%2C AT5G67500/VDAC2%2C AT5G15090/VDAC3%2C AT5G57490/VDAC4%2C AT5G15090/VDAC5). VDACs are reported to be porin-type%2C beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. voltage dependent anion channel 5 (VDAC5)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: anion transport%2C transmembrane transport%3B LOCATED IN: mitochondrial outer membrane%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1)%3B Has 294 Blast hits to 290 proteins in 43 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 6%3B Plants - 279%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). voltage dependent anion channel 5 (VDAC5)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: anion transport%2C transmembrane transport%3B LOCATED IN: mitochondrial outer membrane%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1).Chr3-View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo9g019110No description available.C9-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.C04298No description available.A03-View
Brara.I00844No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
Bv6_128150_iandNo description available.Bvchr6.sca001+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_02221.gNo description available.Ca8-View
Ca_18368.gNo description available.Ca4+View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_28931.gNo description available.Scaffold135584+View
C.cajan_24476.gNo description available.Scaffold132135-View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc07_g07040Mitochondrial outer membrane protein porin 2chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C016818No description available.CM3.5_scaffold00029+View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62004001VDAC2: Mitochondrial outer membrane protein porin 2C_Quinoa_Scaffold_2370+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10026938m.gNo description available.scaffold_8-View
Carubv10017863m.gNo description available.scaffold_5-View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_025797hypothetical proteinDCARv2_Chr7+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
Eucgr.F02253No description available.Chr06+View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.L00213No description available.scaffold_12+View
Migut.H00352No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE02569No description available.LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.01G193700No description available.Chr01+View
Glyma.14G088800No description available.Chr14-View
Glyma.11G048200No description available.Chr11-View
Glyma.17G235700No description available.Chr17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.009G219700No description available.Chr09+View
Gorai.013G050600No description available.Chr13+View
Gorai.008G082900No description available.Chr08+View
Gorai.007G223000No description available.Chr07+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.05G181800No description available.Chromosome05+View
Manes.18G046300No description available.Chromosome18+View

Nelumbo nucifera

Gene id Description Chromosome Strand Multiplicon
NNU_13747Similar to Mitochondrial outer membrane protein porin of 34 kDamegascaffold_6+View
NNU_22555Similar to Mitochondrial outer membrane protein porin of 34 kDamegascaffold_1+View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr019747.1.gNo description available.scaffold3.0+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.1G423200No description available.Pp01-View
Prupe.8G144700No description available.Pp08+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.009G088466No description available.Chr09-View
Potri.005G146800No description available.Chr05+View
Potri.001G293800No description available.Chr01-View
Potri.014G016300No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.30170.000153voltage-dependent anion-selective channel, putative30170-View
RCO.g.29661.000019voltage-dependent anion-selective channel, putative29661+View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp5g12190VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)ch5-1+View
Tp2g29150VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)ch2-4-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400009093Pom30 proteinST4.03ch03-View
PGSC0003DMG400021448Pom30 proteinST4.03ch02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_007229Porin/voltage-dependent anion-selective channel protein%2C putativeNC_023624.1+View
TCA.TCM_034702Voltage dependent anion channel 2NC_023618.1-View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104819265mitochondrial outer membrane protein porin 2-likeNW_010966177.1+View
THA.LOC104821548mitochondrial outer membrane protein porin 2-likeNW_010966459.1+View

Trifolium pratense

Gene id Description Chromosome Strand Multiplicon
TPR.G3769No description available.Tp57577_TGAC_v2_LG1+View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi11g04110No description available.Vr11-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01009346001No description available.chr18-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107424967mitochondrial outer membrane protein porin 2-likeNC_029686.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d048149Mitochondrial outer membrane protein porin 29+View


Download

Gene id
Species
Description
Chromosome
Strand