Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ciclev10005557m.gNo description available.scaffold_9-View
Ciclev10021489m.gNo description available.scaffold_3-View


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn375681F-box family protein; contains IPR001810 (F-box domain, cyclin-like), IPR025886 (Phloem protein 2-like)Chr13-View
Achn302361F-box family protein; contains IPR001810 (F-box domain, cyclin-like)Chr8+View

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH009223Similar to PP2A13: F-box protein PP2-A13 (Arabidopsis thaliana)Scaffold_5-View
AH012355Similar to PP2A13: F-box protein PP2-A13 (Arabidopsis thaliana)Scaffold_7-View
AH018685Similar to P2A12: F-box protein PP2-A12 (Arabidopsis thaliana)Scaffold_12+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.DKH8UF-box protein PP2-A13Araip.B05+View
Araip.V9CZ9F-box protein PP2-A13Araip.B05-View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G43270No description available.scaffold_5+View
AL2G12450No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G61060phloem protein 2-A13 phloem protein 2-A13 (PP2-A13)%3B FUNCTIONS IN: carbohydrate binding%3B INVOLVED IN: N-terminal protein myristoylation%2C response to wounding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1)%3B Has 444 Blast hits to 438 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 444%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr3+View
AT1G63090phloem protein 2-A11 phloem protein 2-A11 (PP2-A11)%3B FUNCTIONS IN: carbohydrate binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1)%3B Has 461 Blast hits to 455 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 461%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr1-View
AT1G12710phloem protein 2-A12 This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber%2C suggesting that this protein could potentially have carbohydrate binding capabilities. phloem protein 2-A12 (PP2-A12)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1)%3B Has 458 Blast hits to 452 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 456%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr1-View
AT5G52120phloem protein 2-A14 phloem protein 2-A14 (PP2-A14)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A13 (TAIR:AT3G61060.1)%3B Has 417 Blast hits to 411 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 417%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0757G168No description available.AmTr_v1.0_scaffold00069+View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo5g016700phloem protein 2-A12C5+View
Bo9g028840No description available.C9-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.D00126No description available.A04-View
Brara.I01211No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
Bv3_066430_fyzhNo description available.Bvchr3_un.sca001+View
Bv1_020160_yfngNo description available.Bvchr1_un.sca002-View
Bv5_101050_ghmzNo description available.Bvchr5.sca002+View

Capsicum annuum

Gene id Description Chromosome Strand Multiplicon
CAN.G170.39No description available.PGAv.1.6.scaffold170+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_04496.gNo description available.Ca4+View
Ca_16392.gNo description available.Ca7+View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_07396.gNo description available.CcLG02+View
C.cajan_20648.gNo description available.CcLG01-View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc02_g37320F-box protein PP2-A13chr2-View
Cc02_g03350F-box protein PP2-A13chr2+View
Cc08_g14040F-box protein PP2-A12chr8-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
Cla021266.gF-box protein PP2-B7Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C006145No description available.CM3.5_scaffold00006+View

Corchorus olitorius

Gene id Description Chromosome Strand Multiplicon
COL.COLO4_12617hypothetical proteinAWUE01014934.1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
Cpa.g.sc18.222No description available.supercontig_18+View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62016023PP2A13: F-box protein PP2-A13C_Quinoa_Scaffold_3256+View
AUR62017289P2A12: F-box protein PP2-A12C_Quinoa_Scaffold_3489+View
AUR62022746PP2A13: F-box protein PP2-A13C_Quinoa_Scaffold_1870-View
AUR62010648P2A12: F-box protein PP2-A12C_Quinoa_Scaffold_1280+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10020482m.gNo description available.scaffold_2+View
Carubv10027209m.gNo description available.scaffold_8-View
Carubv10017758m.gNo description available.scaffold_5+View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.258060No description available.scaffold02229-View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_004676hypothetical proteinDCARv2_Chr1+View
DCAR_025165hypothetical proteinDCARv2_Chr7+View
DCAR_018173hypothetical proteinDCARv2_Chr5-View
DCAR_006759hypothetical proteinDCARv2_Chr2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
Eucgr.K00229No description available.Chr11-View
Eucgr.A02810No description available.Chr01+View
Eucgr.D02244No description available.Chr04-View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.F00370No description available.scaffold_6+View
Migut.B01699No description available.scaffold_2+View
Migut.N01418No description available.scaffold_14+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE32388No description available.LG5-View
FVE13312No description available.LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.10G238700No description available.Chr10+View
Glyma.20G155700No description available.Chr20-View
Glyma.07G077600No description available.Chr07+View
Glyma.03G017000No description available.Chr03+View
Glyma.05G049400No description available.Chr05+View
Glyma.09G145700No description available.Chr09+View
Glyma.16G197800No description available.Chr16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.004G208300No description available.Chr04-View
Gorai.008G279800No description available.Chr08+View
Gorai.007G095600No description available.Chr07-View
Gorai.008G117000No description available.Chr08-View

Hevea brasiliensis

Gene id Description Chromosome Strand Multiplicon
HBR3511G060No description available.NW_018746471.1-View
HBR0621G058No description available.NW_018746114.1-View
HBR0911G050No description available.NW_018745837.1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.01G066600No description available.Chromosome01+View
Manes.06G144300No description available.Chromosome06-View
Manes.01G261700No description available.Chromosome01+View
Manes.02G027400No description available.Chromosome02+View
Manes.14G028700No description available.Chromosome14+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
Medtr4g102770F-box protein PP2-A13chr4-View
Medtr5g010800F-box protein PP2-A13chr5+View
Medtr1g101390F-box protein PP2-A13chr1+View

Nelumbo nucifera

Gene id Description Chromosome Strand Multiplicon
NNU_08787F-box protein PP2-A13megascaffold_8+View
NNU_08210F-box protein PP2-A13megascaffold_2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os02g45320OsFBX58 - F-box domain containing protein, expressedChr2+View
LOC_Os10g37830OsFBX391 - F-box domain containing protein, expressedChr10+View
LOC_Os09g35680OsFBX339 - F-box domain containing protein, expressedChr9-View
LOC_Os03g02550OsFBX76 - F-box domain containing protein, expressedChr3+View
LOC_Os04g48270OsFBX148 - F-box domain containing protein, expressedChr4+View

Petunia axillaris

Gene id Description Chromosome Strand Multiplicon
Peaxi162Scf00102g01432F-box protein PP2-A13Peaxi162Scf00102-View
Peaxi162Scf00021g00721F-box protein PP2-A13Peaxi162Scf00021-View
Peaxi162Scf00233g00044F-box protein PP2-A13Peaxi162Scf00233-View
Peaxi162Scf00714g00617F-box protein PP2-A13Peaxi162Scf00714+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.5G091600No description available.Pp05-View
Prupe.2G156400No description available.Pp02-View
Prupe.2G290600No description available.Pp02-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.002G154300No description available.Chr02-View
Potri.001G109800No description available.Chr01+View
Potri.003G121900F-box family protein; similar to SKP1 interacting partner 3-related; [ co-ortholog (2of2) of At1g12710, At1g63090, ]Chr03-View
Potri.014G075800F-box family protein; similar to lectin-related; similar to low similarity to PP2 lectin polypeptide (Cucurbita maxima) GI:410437; F-box family protein; similar to lectin-related; similar to low similarity to PP2 lectin polypeptide (Cucurbita maxima) G; [Chr14+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.30147.000572ATPP2-A13, putative30147+View
RCO.g.30190.000365ATPP2-A13, putative30190-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc10g017960.1F-box protein PP2-B1 (AHRD V1 *-*- PP2B1_ARATH); contains Interpro domain(s) IPR001810 Cyclin-like F-boxSL2.50ch10-View
Solyc01g091700.2F-box protein PP2-B1 (AHRD V1 ***- PP2B1_ARATH); contains Interpro domain(s) IPR001810 Cyclin-like F-boxSL2.50ch01+View
Solyc08g080360.2F-box protein PP2-B1 (AHRD V1 ***- PP2B1_ARATH); contains Interpro domain(s) IPR001810 Cyclin-like F-boxSL2.50ch08-View
Solyc03g026160.2F-box family protein (AHRD V1 ***- B9ID33_POPTR)SL2.50ch03+View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp5g02300AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)ch5-1-View
Tp1g11290AtPP2-A12 (Phloem protein 2-A12)ch1-1-View
Tp2g01500AtPP2-A11 (Phloem protein 2-A11)ch2-1+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400010258F-box family proteinST4.03ch10+View
PGSC0003DMG400014315F-box family proteinST4.03ch03-View
PGSC0003DMG400027777F-box family proteinST4.03ch01+View
PGSC0003DMG400022762F-box family proteinST4.03ch08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_015102Phloem protein 2-A13NC_023623.1-View
TCA.TCM_005420Phloem protein 2-A13NC_023625.1+View
TCA.TCM_016185Phloem protein 2-A12%2C putativeNC_023623.1-View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104817271F-box protein PP2-A13-likeNW_010965946.1-View
THA.LOC104809420F-box protein PP2-A12-likeNW_010965019.1+View
THA.LOC104802012F-box protein PP2-A13-likeNW_010970490.1-View

Trifolium pratense

Gene id Description Chromosome Strand Multiplicon
TPR.G17413No description available.Tp57577_TGAC_v2_scaf_229+View
TPR.G17581No description available.Tp57577_TGAC_v2_scaf_223-View

Utricularia gibba

Gene id Description Chromosome Strand Multiplicon
UGI.Scf00001.326No description available.Scf00001+View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi07g13340No description available.Vr07-View
Vradi09g09870No description available.Vr09-View
Vradi08g19090No description available.Vr08+View
Vradi01g14760No description available.Vr01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01019854001No description available.chr2+View
GSVIVG01027514001No description available.chr15-View
GSVIVG01010614001No description available.chr16-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107414433F-box protein PP2-A14NC_029681.1+View
ZJU.LOC107433434F-box protein PP2-A13-likeNW_015453397.1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d027361F-box protein PP2-A131+View


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Gene id
Species
Description
Chromosome
Strand