Anchorpoints

Gene id
Cc01_g00190
Organism
Coffea canephora

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn278011Tetratricopeptide repeat protein; contains IPR001478 (PDZ domain), IPR011990 (Tetratricopeptide-like helical)Chr28-View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G63500No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G55480protein containing PDZ domain, a K-box domain, and a TPR region Encodes a member of a novel plant protein family containing a PDZ%2C a K-box%2C and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding. protein containing PDZ domain%2C a K-box domain%2C and a TPR region (ZKT)%3B FUNCTIONS IN: binding%3B INVOLVED IN: response to wounding%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C PDZ/DHR/GLGF (InterPro:IPR001478)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.2)%3B Has 316 Blast hits to 316 proteins in 83 species: Archae - 2%3B Bacteria - 103%3B Metazoa - 8%3B Fungi - 2%3B Plants - 160%3B Viruses - 0%3B Other Eukaryotes - 41 (source: NCBI BLink).Chr1+View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo6g051340protein containing PDZ domain, a K-box domain, and a TPR regionC6+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.E01462No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
Bv4_070870_fzrxNo description available.Bvchr4.sca001+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_08672.gNo description available.Ca6-View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10018072m.gNo description available.scaffold_2-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
Cla003123.gMediator of RNA polymerase II transcription subunit 21Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C014728No description available.CM3.5_scaffold00022-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
Cpa.g.sc119.36No description available.supercontig_119-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10011413m.gNo description available.scaffold_1+View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.152700No description available.scaffold01124+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
Eucgr.J01758No description available.Chr10+View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.N00542No description available.scaffold_14+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE01598No description available.LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.08G124900No description available.Chr08+View
Glyma.05G166800No description available.Chr05+View

Hevea brasiliensis

Gene id Description Chromosome Strand Multiplicon
HBR2759G072No description available.NW_018746281.1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MDO.mRNA.g.1539.11No description available.Backbone_1539-View
MDO.mRNA.g.872.25No description available.Backbone_872+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.15G110100No description available.Chromosome15-View

Nelumbo nucifera

Gene id Description Chromosome Strand Multiplicon
NNU_23619Tetratricopeptide repeat protein 30Amegascaffold_2-View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr030173.1.gNo description available.scaffold513.0-View
Pbr000766.1.gNo description available.scaffold10.0-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.6G002700No description available.Pp06+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.003G222200No description available.Chr03-View
Potri.001G002700No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.28842.000034protein binding protein, putative28842+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g005520.2Tetratricopeptide TPR_2 repeat protein (AHRD V1 *--- A8ZVN6_DESOH); contains Interpro domain(s) IPR001478 PDZ/DHR/GLGFSL2.50ch01+View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp1g41090binding / protein bindingch1-2+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_039852hypothetical proteinNC_023617.1+View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104810318uncharacterized protein LOC104810318NW_010965216.1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01025488001No description available.chr6+View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107415058uncharacterized protein LOC107415058NC_029682.1+View


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Gene id
Species
Description
Chromosome
Strand