Anchorpoints
- Gene id
- Cc01_g00190
- Organism
- Coffea canephora
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Actinidia chinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Achn278011 | Tetratricopeptide repeat protein; contains IPR001478 (PDZ domain), IPR011990 (Tetratricopeptide-like helical) | Chr28 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G63500 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G55480 | protein containing PDZ domain, a K-box domain, and a TPR region Encodes a member of a novel plant protein family containing a PDZ%2C a K-box%2C and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding. protein containing PDZ domain%2C a K-box domain%2C and a TPR region (ZKT)%3B FUNCTIONS IN: binding%3B INVOLVED IN: response to wounding%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C PDZ/DHR/GLGF (InterPro:IPR001478)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.2)%3B Has 316 Blast hits to 316 proteins in 83 species: Archae - 2%3B Bacteria - 103%3B Metazoa - 8%3B Fungi - 2%3B Plants - 160%3B Viruses - 0%3B Other Eukaryotes - 41 (source: NCBI BLink). | Chr1 | + | View |
Brassica oleracea
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Bo6g051340 | protein containing PDZ domain, a K-box domain, and a TPR region | C6 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Brara.E01462 | No description available. | A05 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Bv4_070870_fzrx | No description available. | Bvchr4.sca001 | + | View |
Cicer arietinum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Ca_08672.g | No description available. | Ca6 | - | View |
Citrus clementina
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Ciclev10018072m.g | No description available. | scaffold_2 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Cla003123.g | Mediator of RNA polymerase II transcription subunit 21 | Chr2 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MELO3C014728 | No description available. | CM3.5_scaffold00022 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Cpa.g.sc119.36 | No description available. | supercontig_119 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Carubv10011413m.g | No description available. | scaffold_1 | + | View |
Cucumis sativus L.
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Cucsa.152700 | No description available. | scaffold01124 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Eucgr.J01758 | No description available. | Chr10 | + | View |
Erythranthe guttata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Migut.N00542 | No description available. | scaffold_14 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FVE01598 | No description available. | LG3 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Glyma.08G124900 | No description available. | Chr08 | + | View |
| Glyma.05G166800 | No description available. | Chr05 | + | View |
Hevea brasiliensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| HBR2759G072 | No description available. | NW_018746281.1 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MDO.mRNA.g.1539.11 | No description available. | Backbone_1539 | - | View |
| MDO.mRNA.g.872.25 | No description available. | Backbone_872 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Manes.15G110100 | No description available. | Chromosome15 | - | View |
Nelumbo nucifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| NNU_23619 | Tetratricopeptide repeat protein 30A | megascaffold_2 | - | View |
Pyrus bretschneideri
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Pbr030173.1.g | No description available. | scaffold513.0 | - | View |
| Pbr000766.1.g | No description available. | scaffold10.0 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Prupe.6G002700 | No description available. | Pp06 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Potri.003G222200 | No description available. | Chr03 | - | View |
| Potri.001G002700 | No description available. | Chr01 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RCO.g.28842.000034 | protein binding protein, putative | 28842 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Solyc01g005520.2 | Tetratricopeptide TPR_2 repeat protein (AHRD V1 *--- A8ZVN6_DESOH); contains Interpro domain(s) IPR001478 PDZ/DHR/GLGF | SL2.50ch01 | + | View |
Schrenkiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| Tp1g41090 | binding / protein binding | ch1-2 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TCA.TCM_039852 | hypothetical protein | NC_023617.1 | + | View |
Tarenaya hassleriana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| THA.LOC104810318 | uncharacterized protein LOC104810318 | NW_010965216.1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GSVIVG01025488001 | No description available. | chr6 | + | View |
Ziziphus jujuba
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZJU.LOC107415058 | uncharacterized protein LOC107415058 | NC_029682.1 | + | View |
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