Anchorpoints

Gene id
Brara.C04298
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Brara.I00844No description available.A09-View
Brara.F02474No description available.A06-View


Orthologs (inter-species colinear regions)

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH003870Similar to VDAC2: Mitochondrial outer membrane protein porin 2 (Arabidopsis thaliana)Scaffold_2-View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G43800No description available.scaffold_8-View
AL5G29930No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G67500voltage dependent anion channel 2 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1%2C AT5G67500/VDAC2%2C AT5G15090/VDAC3%2C AT5G57490/VDAC4%2C AT5G15090/VDAC5). VDACs are reported to be porin-type%2C beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. voltage dependent anion channel 2 (VDAC2)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: response to bacterium%2C anion transport%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 5 (TAIR:AT3G49920.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
AT3G49920voltage dependent anion channel 5 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1%2C AT5G67500/VDAC2%2C AT5G15090/VDAC3%2C AT5G57490/VDAC4%2C AT5G15090/VDAC5). VDACs are reported to be porin-type%2C beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. voltage dependent anion channel 5 (VDAC5)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: anion transport%2C transmembrane transport%3B LOCATED IN: mitochondrial outer membrane%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1)%3B Has 294 Blast hits to 290 proteins in 43 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 6%3B Plants - 279%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). voltage dependent anion channel 5 (VDAC5)%3B FUNCTIONS IN: voltage-gated anion channel activity%3B INVOLVED IN: anion transport%2C transmembrane transport%3B LOCATED IN: mitochondrial outer membrane%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Porin%2C eukaryotic type (InterPro:IPR001925)%3B BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 2 (TAIR:AT5G67500.1).Chr3-View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo7g099130voltage dependent anion channel 5C7-View
Bo9g019110No description available.C9-View

Capsicum annuum

Gene id Description Chromosome Strand Multiplicon
CAN.G1075.30No description available.PGAv.1.6.scaffold1075+View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_01675.gNo description available.CcLG11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C016818No description available.CM3.5_scaffold00029+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
Cpa.g.sc6.23No description available.supercontig_6-View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62004001VDAC2: Mitochondrial outer membrane protein porin 2C_Quinoa_Scaffold_2370+View
AUR62040245VDAC2: Mitochondrial outer membrane protein porin 2C_Quinoa_Scaffold_4447-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10026938m.gNo description available.scaffold_8-View
Carubv10017863m.gNo description available.scaffold_5-View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.352820No description available.scaffold03533+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE05750No description available.LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.01G193700No description available.Chr01+View
Glyma.11G048200No description available.Chr11-View
Glyma.17G097100No description available.Chr17-View
Glyma.17G235700No description available.Chr17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.008G190600No description available.Chr08-View
Gorai.007G223000No description available.Chr07+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.6G221700No description available.Pp06-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc02g092440.2Mitochondrial porin (Voltage-dependent anion channel) outer membrane protein (AHRD V1 **** C4R1Z2_PICPG); contains Interpro domain(s) IPR001925 Porin, eukaryotic typeSL2.50ch02-View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp5g12190VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)ch5-1+View
Tp2g29150VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)ch2-4-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400021448Pom30 proteinST4.03ch02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_007229Porin/voltage-dependent anion-selective channel protein%2C putativeNC_023624.1+View
TCA.TCM_000790Voltage dependent anion channel 2NC_023625.1+View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104819265mitochondrial outer membrane protein porin 2-likeNW_010966177.1+View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi11g04110No description available.Vr11-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107424967mitochondrial outer membrane protein porin 2-likeNC_029686.1+View


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Gene id
Species
Description
Chromosome
Strand