Anchorpoints

Gene id
Brara.A03169
Organism
Brassica rapa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Brara.D02073No description available.A04-View
Brara.C03544No description available.A03+View


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn139881Protein trichome birefringence-like 41; contains IPR026057 (PC-Esterase)Chr17+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.XWB1JPREDICTED: protein YLS7-like [Glycine max]Araip.B03+View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G29950No description available.scaffold_4-View
AL3G27160No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G14850TRICHOME BIREFRINGENCE-LIKE 41 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 41 (TBL41)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1)%3B Has 1268 Blast hits to 1259 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1266%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). TRICHOME BIREFRINGENCE-LIKE 41 (TBL41)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1)%3B Has 1339 Blast hits to 1315 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1337%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr3+View
AT2G34070TRICHOME BIREFRINGENCE-LIKE 37 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 37 (TBL37)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1)%3B Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1342%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr2-View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo5g127690No description available.C5-View
Bo3g066440No description available.C3+View
Bo1g129910No description available.C1-View

Capsicum annuum

Gene id Description Chromosome Strand Multiplicon
CAN.G904.31No description available.PGAv.1.6.scaffold904-View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_21867.gNo description available.CcLG04+View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc05_g10760TRICHOME BIREFRINGENCE-LIKE 42chr5-View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10023594m.gNo description available.scaffold_3-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
Cla002432.gProtein trichome birefringence-like 33Chr7+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10023411m.gNo description available.scaffold_4-View
Carubv10014063m.gNo description available.scaffold_3+View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_019608hypothetical proteinDCARv2_Chr5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
Eucgr.B03636No description available.Chr02+View
Eucgr.F03235No description available.Chr06-View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.H02021No description available.scaffold_8+View
Migut.H01451No description available.scaffold_8+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.006G088800No description available.Chr06-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.03G103100No description available.Chromosome03-View

Petunia axillaris

Gene id Description Chromosome Strand Multiplicon
Peaxi162Scf00111g01476TRICHOME BIREFRINGENCE-LIKE 43Peaxi162Scf00111-View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr017373.1.gNo description available.scaffold26.0+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.4G157100No description available.Pp04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.011G106200No description available.Chr11-View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp4g16420unknown proteinch4-6-View
Tp3g13060unknown proteinch3-1+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400021298Conserved gene of unknown functionST4.03ch10+View
PGSC0003DMG400007093Conserved gene of unknown functionST4.03ch07-View
PGSC0003DMG400015340Conserved gene of unknown functionST4.03ch12-View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104810432protein trichome birefringence-like 41NW_010965216.1+View
THA.LOC104822571protein trichome birefringence-like 41NW_010966725.1-View


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Gene id
Species
Description
Chromosome
Strand