Anchorpoints

Gene id
Achn191211
Organism
Actinidia chinensis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Achn303161BTB/POZ domain-containing protein; contains IPR027356 (NPH3 domain)Chr28-View
Achn314061BTB/POZ domain-containing protein; contains IPR011333 (BTB/POZ fold), IPR027356 (NPH3 domain)Chr15-View
Achn287581BTB/POZ domain-containing protein; contains IPR011333 (BTB/POZ fold), IPR027356 (NPH3 domain)Chr3-View
Achn034761BTB/POZ domain-containing protein; contains IPR011333 (BTB/POZ fold), IPR027356 (NPH3 domain)Chr13+View


Orthologs (inter-species colinear regions)

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.L40SBPREDICTED: BTB/POZ domain-containing protein [Glycine max]Araip.B01+View
Araip.51YTTPREDICTED: BTB/POZ domain-containing protein [Glycine max]Araip.B07+View

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G25400No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G30520Phototropic-responsive NPH3 family protein light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis ROOT PHOTOTROPISM 2 (RPT2)%3B FUNCTIONS IN: signal transducer activity%3B INVOLVED IN: phototropism%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249)%2C BTB/POZ (InterPro:IPR013069)%2C BTB/POZ fold (InterPro:IPR011333)%2C BTB/POZ-like (InterPro:IPR000210)%3B BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1)%3B Has 1044 Blast hits to 1009 proteins in 58 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 171%3B Fungi - 0%3B Plants - 865%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink).Chr2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR1127G091No description available.AmTr_v1.0_scaffold00077+View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo4g057410No description available.C4+View
Bo3g024700No description available.C3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.E01281No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
Bv7_156670_fzfiNo description available.Bvchr7.sca001+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_09509.gNo description available.Ca3-View
Ca_08907.gNo description available.Ca5-View
Ca_15674.gNo description available.Ca2-View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_19727.gNo description available.CcLG01-View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc01_g15410Root phototropism protein 2chr1-View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10000673m.gNo description available.scaffold_5+View
Ciclev10011315m.gNo description available.scaffold_6-View

Corchorus olitorius

Gene id Description Chromosome Strand Multiplicon
COL.COLO4_11224hypothetical proteinAWUE01014657.1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
Cpa.g.sc2.272No description available.supercontig_2+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10022870m.gNo description available.scaffold_4-View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_018580hypothetical proteinDCARv2_Chr5-View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.J00016No description available.scaffold_10+View
Migut.N00714No description available.scaffold_14+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE13582No description available.LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.11G200100No description available.Chr11-View
Glyma.18G216600No description available.Chr18-View
Glyma.14G206100No description available.Chr14-View
Glyma.02G237100No description available.Chr02-View
Glyma.09G272500No description available.Chr09+View
Glyma.18G050800No description available.Chr18+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.001G119000No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MDO.mRNA.g.5787.16No description available.Backbone_5787-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.08G169100No description available.Chromosome08+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
Medtr5g075640root phototropism-like proteinchr5-View
Medtr3g062540root phototropism-like proteinchr3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os12g02530BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressedChr12-View

Petunia axillaris

Gene id Description Chromosome Strand Multiplicon
Peaxi162Scf00732g00134Phototropic-responsive NPH3 family proteinPeaxi162Scf00732+View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr017303.1.gNo description available.scaffold259.0-View
Pbr013158.1.gNo description available.scaffold2.0-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.6G039200No description available.Pp06+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.019G131600similar to ROOT PHOTOTROPISM 2; [ co-ortholog (2of2) of At2g30520, ]Chr19-View
Potri.013G159000similar to ROOT PHOTOTROPISM 2; [ co-ortholog (1of2) of At2g30520, ]Chr13-View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp4g13070RPT2 (ROOT PHOTOTROPISM 2)ch4-6-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_042307Phototropic-responsive NPH3 family proteinNC_023617.1-View
TCA.TCM_019662Phototropic-responsive NPH3 family protein isoform 2NC_023622.1+View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104826263root phototropism protein 2NW_010967707.1+View
THA.LOC104800795root phototropism protein 2-likeNW_010969548.1-View
THA.LOC104799720putative BTB/POZ domain-containing protein At5g13600NW_010968505.1+View

Trifolium pratense

Gene id Description Chromosome Strand Multiplicon
TPR.G13900No description available.Tp57577_TGAC_v2_scaf_410-View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi06g06310No description available.Vr06+View
Vradi10g04000No description available.Vr10-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01024542001No description available.chr6-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107411591root phototropism protein 2NC_029680.1-View


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Gene id
Species
Description
Chromosome
Strand