Anchorpoints

Gene id
AL7G15090
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G50830No description available.scaffold_3+View
AL1G32900No description available.scaffold_1+View
AL5G31720No description available.scaffold_5+View
AL2G35850No description available.scaffold_2+View


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn296761Rac-like GTP-binding protein; contains IPR001806 (Small GTPase superfamily), IPR005225 (Small GTP-binding protein domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)Chr5+View
Achn094611Rac-like GTP-binding protein 6; contains IPR001806 (Small GTPase superfamily), IPR005225 (Small GTP-binding protein domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)Chr21+View
Achn207591Rac-like GTP-binding protein; contains IPR001806 (Small GTPase superfamily), IPR005225 (Small GTP-binding protein domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)Chr5+View
Achn075801Putative 3-dehydroquinate synthase; contains IPR001806 (Small GTPase superfamily), IPR002041 (Ran GTPase), IPR005225 (Small GTP-binding protein domain), IPR016037 (3-dehydroquinate synthase AroB), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)Chr1-View

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH000810Similar to ARAC3: Rac-like GTP-binding protein ARAC3 (Arabidopsis thaliana)Scaffold_1-View
AH016776Similar to ARAC3: Rac-like GTP-binding protein ARAC3 (Arabidopsis thaliana)Scaffold_11+View
AH006463Similar to RHO1: Rac-like GTP-binding protein RHO1 (Beta vulgaris)Scaffold_3+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.GRP0PPREDICTED: rac-like GTP-binding protein 7-like [Glycine max]Araip.B05-View
Araip.3Q5XKPREDICTED: rac-like GTP-binding protein 7-like [Glycine max]Araip.B01-View
Araip.F4TTYPREDICTED: rac-like GTP-binding protein 7-like [Glycine max]Araip.B03-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G20090RHO-related protein from plants 2 Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening. RHO-related protein from plants 2 (ROP2)%3B CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225)%2C Ras GTPase (InterPro:IPR001806)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%3B BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1)%3B Has 24645 Blast hits to 24619 proteins in 682 species: Archae - 9%3B Bacteria - 67%3B Metazoa - 12700%3B Fungi - 3846%3B Plants - 2697%3B Viruses - 20%3B Other Eukaryotes - 5306 (source: NCBI BLink).Chr1+View
AT2G17800RAC-like 1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. Arabidopsis RAC-like 1 (ARAC1)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: auxin mediated signaling pathway%2C abscisic acid mediated signaling pathway%3B LOCATED IN: nucleus%2C cytoplasm%2C phragmoplast%2C spindle%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras (InterPro:IPR013753)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%3B BEST Arabidopsis thaliana protein match is: RAC-like 6 (TAIR:AT4G35950.1)%3B Has 24212 Blast hits to 24183 proteins in 668 species: Archae - 9%3B Bacteria - 59%3B Metazoa - 12648%3B Fungi - 3488%3B Plants - 2694%3B Viruses - 20%3B Other Eukaryotes - 5294 (source: NCBI BLink). Arabidopsis RAC-like 1 (ARAC1)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: auxin mediated signaling pathway%2C abscisic acid mediated signaling pathway%3B LOCATED IN: nucleus%2C cytoplasm%2C phragmoplast%2C spindle%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras (InterPro:IPR013753)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%3B BEST Arabidopsis thaliana protein match is: RAC-like 6 (TAIR:AT4G35950.1)%3B Has 24222 Blast hits to 24193 proteins in 669 species: Archae - 9%3B Bacteria - 59%3B Metazoa - 12649%3B Fungi - 3497%3B Plants - 2694%3B Viruses - 20%3B Other Eukaryotes - 5294 (source: NCBI BLink).Chr2+View
AT3G51290pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) Protein of unknown function (DUF630) %3BProtein of unknown function (DUF632)%3B INVOLVED IN: N-terminal protein myristoylation%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868)%2C Protein of unknown function DUF632 (InterPro:IPR006867)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1)%3B Has 36219 Blast hits to 19553 proteins in 1081 species: Archae - 111%3B Bacteria - 4892%3B Metazoa - 13250%3B Fungi - 3535%3B Plants - 7790%3B Viruses - 1372%3B Other Eukaryotes - 5269 (source: NCBI BLink). FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: intracellular%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868)%2C Protein of unknown function DUF632 (InterPro:IPR006867)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras GTPase (InterPro:IPR001806)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G02110.1).Chr3+View
AT4G35950RAC-like 6 A member of ROP GTPases gene family-like. GTP binding protein Arac6. RAC-like 6 (RAC6)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: small GTPase mediated signal transduction%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras (InterPro:IPR013753)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%3B BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2)%3B Has 24191 Blast hits to 24163 proteins in 668 species: Archae - 9%3B Bacteria - 59%3B Metazoa - 12632%3B Fungi - 3489%3B Plants - 2692%3B Viruses - 20%3B Other Eukaryotes - 5290 (source: NCBI BLink).Chr4-View
AT1G75840RAC-like GTP binding protein 5 Belongs to the plant-specific ROP group of Rho GTPases%3B localized to the plasma membrane of tips of root hairs%3B involved in polar growth control. RAC-like GTP binding protein 5 (ARAC5)%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras (InterPro:IPR013753)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%3B BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1)%3B Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9%3B Bacteria - 69%3B Metazoa - 12688%3B Fungi - 3833%3B Plants - 2700%3B Viruses - 20%3B Other Eukaryotes - 5313 (source: NCBI BLink).Chr1+View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo1g006070No description available.C1+View
Bo8g081690No description available.C8-View
Bo3g093780No description available.C3+View
Bo1g006800No description available.C1-View
Bo9g024740No description available.C9+View
Bo7g117710No description available.C7-View
Bo6g119920No description available.C6+View
Bo8g069990No description available.C8+View
Bo7g100890No description available.C7+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.G03386No description available.A07+View
Brara.A00251No description available.A01+View
Brara.C04159No description available.A03+View
Brara.K01334No description available.Scaffold58736+View
Brara.I01044No description available.A09-View
Brara.I03464No description available.A09+View
Brara.G00236No description available.A07-View
Brara.F02526No description available.A06-View
Brara.A00328No description available.A01-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
Bv6_130240_jomsNo description available.Bvchr6.sca002-View
Bv9_214100_zifuNo description available.Bvchr9.sca025-View

Capsicum annuum

Gene id Description Chromosome Strand Multiplicon
CAN.G354.44No description available.PGAv.1.6.scaffold354+View
CAN.G1274.32No description available.PGAv.1.6.scaffold1274+View
CAN.G588.75No description available.PGAv.1.6.scaffold588+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_09951.gNo description available.Ca7-View
Ca_01950.gNo description available.Ca8+View

Cajanus cajan

Gene id Description Chromosome Strand Multiplicon
C.cajan_21311.gNo description available.CcLG04-View
C.cajan_12528.gNo description available.CcLG06+View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc07_g11070Rac-like GTP-binding protein RHO1chr7+View
Cc02_g16210Rac-like GTP-binding protein ARAC3chr2-View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10026539m.gNo description available.scaffold_7-View
Ciclev10002551m.gNo description available.scaffold_5+View
Ciclev10029311m.gNo description available.scaffold_8-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
Cla022410.gRho-related GTP-binding protein RhoCChr8-View
Cla008911.gRac-like GTP-binding protein 5Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C013754No description available.CM3.5_scaffold00021-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
Cpa.g.sc6.287No description available.supercontig_6+View
Cpa.g.sc37.141No description available.supercontig_37-View
Cpa.g.sc26.304No description available.supercontig_26-View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62003337RHO1: Rac-like GTP-binding protein RHO1C_Quinoa_Scaffold_1000-View
AUR62029501RAC1: Rac-like GTP-binding protein RAC1C_Quinoa_Scaffold_3036+View
AUR62013037ARAC3: Rac-like GTP-binding protein ARAC3C_Quinoa_Scaffold_1040-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10019628m.gNo description available.scaffold_5+View
Carubv10020981m.gNo description available.scaffold_2+View
Carubv10005781m.gNo description available.scaffold_7+View
Carubv10014691m.gNo description available.scaffold_3+View
Carubv10010350m.gNo description available.scaffold_1+View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.322750No description available.scaffold03080+View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_013882hypothetical proteinDCARv2_Chr4-View
DCAR_011604hypothetical proteinDCARv2_Chr3+View
DCAR_023139hypothetical proteinDCARv2_Chr6+View
DCAR_009496hypothetical proteinDCARv2_Chr3+View
DCAR_010141hypothetical proteinDCARv2_Chr3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
Eucgr.I01414No description available.Chr09+View
Eucgr.J02468No description available.Chr10+View
Eucgr.I02331No description available.Chr09-View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.B00084No description available.scaffold_2-View
Migut.N01318No description available.scaffold_14+View
Migut.C00859No description available.scaffold_3+View
Migut.H02179No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE14571No description available.LG1-View
FVE08552No description available.LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.04G023300No description available.Chr04-View
Glyma.12G032700No description available.Chr12+View
Glyma.11G107700No description available.Chr11+View
Glyma.16G124400No description available.Chr16+View
Glyma.11G079100No description available.Chr11+View
Glyma.06G023300No description available.Chr06-View
Glyma.02G046100No description available.Chr02+View
Glyma.01G164200No description available.Chr01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.010G002600No description available.Chr10-View
Gorai.009G193300No description available.Chr09-View
Gorai.002G197500No description available.Chr02+View
Gorai.005G112500No description available.Chr05+View
Gorai.008G036100No description available.Chr08+View
Gorai.009G269600No description available.Chr09-View
Gorai.007G192300No description available.Chr07-View
Gorai.003G008000No description available.Chr03-View

Hevea brasiliensis

Gene id Description Chromosome Strand Multiplicon
HBR3358G083No description available.NW_018745789.1-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MDO.mRNA.g.968.19No description available.Backbone_968+View
MDO.mRNA.g.869.16No description available.Backbone_869-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.02G107400No description available.Chromosome02+View
Manes.18G011800No description available.Chromosome18+View
Manes.01G148700No description available.Chromosome01+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
Medtr8g075240Rho-like GTP-binding proteinchr8+View
Medtr5g022600Rho-like GTP-binding proteinchr5+View

Nelumbo nucifera

Gene id Description Chromosome Strand Multiplicon
NNU_18423Rac-like GTP-binding protein ARAC3megascaffold_14+View
NNU_23859Rac-like GTP-binding protein ARAC3megascaffold_6+View

Petunia axillaris

Gene id Description Chromosome Strand Multiplicon
Peaxi162Scf00328g00529RAC-like GTP binding protein 5Peaxi162Scf00328-View
Peaxi162Scf00362g00638RAC-like GTP binding protein 5Peaxi162Scf00362-View
Peaxi162Scf00635g00714RAC-like GTP binding protein 5Peaxi162Scf00635+View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr023296.1.gNo description available.scaffold357.0+View
Pbr034817.1.gNo description available.scaffold66.0-View
Pbr005814.1.gNo description available.scaffold13.0+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.8G165000No description available.Pp08+View
Prupe.1G362900No description available.Pp01+View
Prupe.7G171700No description available.Pp07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.004G174900similar to small GTPase Rac4. [ORG:Medicago sativa]; [ co-ortholog (1of3) of CAG30067, BAA76424, AAM18133, ]Chr04+View
Potri.005G242000similar to small GTPase Rac4. [ORG:Medicago sativa]; [ co-ortholog (3of3) of CAG30067, BAA76424, AAM18133, ]Chr05+View
Potri.005G110700similar to RAC-like GTP binding protein RHO1 (GTPase protein ROP1). [ORG:Pisum sativum]; [ co-ortholog (1of2) of Q35638, At4g35950, At3g51300, At4g35020, At2g17800, ]Chr05-View
Potri.002G019500similar to RAC-like GTP binding protein ARAC4 (GTPase protein ROP2).; [ ortholog of At1g20090,At1g75840,]Chr02-View
Potri.009G134600similar to small GTPase Rac4. [ORG:Medicago sativa]; [ co-ortholog (2of3) of CAG30067, BAA76424, AAM18133, ]Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.28962.000029rac gtpase, putative28962-View
RCO.g.30170.000797rac gtpase, putative30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc03g033420.2Rho-related GTP-binding protein RhoC (AHRD V1 **-- RHOC_PONAB); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typeSL2.50ch03-View
Solyc02g083580.2Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typeSL2.50ch02-View
Solyc01g111560.2Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typeSL2.50ch01+View
Solyc02g062020.2Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typeSL2.50ch02-View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp5g30980ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)ch5-7+View
Tp3g31210ARAC1ch3-6+View
Tp7g33730ARAC6 (ARABIDOPSIS RAC-LIKE 6)ch7-6-View
Tp7g32780ARAC3 (ARABIDOPSIS RAC-LIKE 3)ch7-5+View
Tp1g17860ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)ch1-1+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400022556NTGP2ST4.03ch03-View
PGSC0003DMG400006189Rac-like GTP-binding proteinST4.03ch01+View
PGSC0003DMG400003583Rac-like GTPase 1ST4.03ch02-View
PGSC0003DMG400023882GTP-binding Rop/Rac GTPaseST4.03ch02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_000166RAC-like GTP binding protein 5 isoform 3NC_023625.1-View
TCA.TCM_034257RAC-like 3NC_023618.1+View
TCA.TCM_006630RAC-like 3NC_023624.1-View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104819172rac-like GTP-binding protein ARAC11NW_010966177.1-View
THA.LOC104826530rac-like GTP-binding protein ARAC11 isoform X1NW_010960188.1-View
THA.LOC104819743rac-like GTP-binding protein ARAC11NW_010966177.1-View
THA.LOC104813784rac-like GTP-binding protein ARAC5NW_010965373.1-View
THA.LOC104807503rac-like GTP-binding protein ARAC1NW_010963495.1+View
THA.LOC104821338rac-like GTP-binding protein RHO1NW_010966459.1+View
THA.LOC104811426rac-like GTP-binding protein ARAC5NW_010965372.1+View

Trifolium pratense

Gene id Description Chromosome Strand Multiplicon
TPR.G19486No description available.Tp57577_TGAC_v2_LG4+View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi02g02860No description available.Vr02+View
Vradi05g13970No description available.Vr05+View
Vradi11g06550No description available.Vr11+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01024029001No description available.chr3+View
GSVIVG01009947001No description available.chr18+View
GSVIVG01018729001No description available.chr4+View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107420406rac-like GTP-binding protein RAC1NC_029684.1+View
ZJU.LOC107424469rac-like GTP-binding protein RHO1NC_029686.1+View


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