Anchorpoints

Gene id
AL4G29950
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G42770No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Actinidia chinensis

Gene id Description Chromosome Strand Multiplicon
Achn124951Protein trichome birefringence-like 38; contains IPR025846 (PMR5 N-terminal domain), IPR026057 (PC-Esterase)Chr6+View

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH014839Similar to TBL37: Protein trichome birefringence-like 37 (Arabidopsis thaliana)Scaffold_9+View
AH021402Similar to TBL37: Protein trichome birefringence-like 37 (Arabidopsis thaliana)Scaffold_14+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.TGR6WPREDICTED: protein YLS7-like [Glycine max]Araip.B03-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G34070TRICHOME BIREFRINGENCE-LIKE 37 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 37 (TBL37)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 38 (TAIR:AT1G29050.1)%3B Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1342%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr2-View
AT1G29050TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 38 (TBL38)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 37 (TAIR:AT2G34070.1)%3B Has 1347 Blast hits to 1329 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1344%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).Chr1-View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo4g182380No description available.C4-View
Bo7g045830No description available.C7+View
Bo5g057320No description available.C5-View
Bo3g027570No description available.C3-View
Bo4g041200No description available.C4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.G00784No description available.A07+View
Brara.C01729No description available.A03-View
Brara.D02073No description available.A04-View
Brara.E01002No description available.A05+View
Brara.I02920No description available.A09-View
Brara.A03169No description available.A01-View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_00382.gNo description available.Ca1-View
Ca_02479.gNo description available.Ca1+View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10015687m.gNo description available.scaffold_2-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
Cla019681.gProtein trichome birefringence-like 38Chr3+View
Cla009685.gProtein trichome birefringence-like 38Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C007219No description available.CM3.5_scaffold00007+View
MELO3C002641No description available.CM3.5_scaffold00001-View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62031168TBL38: Protein trichome birefringence-like 38C_Quinoa_Scaffold_1829-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10023411m.gNo description available.scaffold_4-View
Carubv10009422m.gNo description available.scaffold_1-View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.046870No description available.scaffold00542-View

Daucus carota

Gene id Description Chromosome Strand Multiplicon
DCAR_028011hypothetical proteinDCARv2_Chr8-View

Erythranthe guttata

Gene id Description Chromosome Strand Multiplicon
Migut.H01451No description available.scaffold_8+View
Migut.M01049No description available.scaffold_13+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE29821No description available.LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.13G291700No description available.Chr13+View
Glyma.13G230800No description available.Chr13+View
Glyma.12G122300No description available.Chr12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.011G033800No description available.Chr11-View
Gorai.006G088800No description available.Chr06-View
Gorai.010G242200No description available.Chr10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.16G037300No description available.Chromosome16-View
Manes.17G054100No description available.Chromosome17-View

Pyrus bretschneideri

Gene id Description Chromosome Strand Multiplicon
Pbr000472.1.gNo description available.scaffold1.0-View
Pbr016154.1.gNo description available.scaffold24.0+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.4G059400No description available.Pp04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.004G055000No description available.Chr04-View
Potri.011G064700No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.29900.000063conserved hypothetical protein29900-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc03g006220.2Os06g0207500 protein (Fragment) (AHRD V1 **-- Q0DDQ9_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plantSL2.50ch03+View
Solyc02g077080.2Os06g0207500 protein (Fragment) (AHRD V1 **-- Q0DDQ9_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plantSL2.50ch02+View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp4g16420unknown proteinch4-6-View
Tp1g24990unknown proteinch1-1-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400020431Conserved gene of unknown functionST4.03ch07-View
PGSC0003DMG400004387Alpha galactosidaseST4.03ch03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_029724Trichome birefringence-like 37 isoform 1NC_023620.1+View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104820587protein trichome birefringence-like 37NW_010966274.1-View
THA.LOC104812633protein trichome birefringence-like 38NW_010965372.1-View
THA.LOC104814246protein trichome birefringence-like 38NW_010965451.1-View

Trifolium pratense

Gene id Description Chromosome Strand Multiplicon
TPR.G11739No description available.Tp57577_TGAC_v2_LG4+View

Vigna radiata var. radiata

Gene id Description Chromosome Strand Multiplicon
Vradi10g10210No description available.Vr10+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01021192001No description available.chr10-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107411466protein trichome birefringence-like 38NC_029679.1-View


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Gene id
Species
Description
Chromosome
Strand