Anchorpoints

Gene id
AL1G24310
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G12450No description available.scaffold_2+View
AL8G26490No description available.scaffold_8-View


Orthologs (inter-species colinear regions)

Amaranthus hypochondriacus

Gene id Description Chromosome Strand Multiplicon
AH012355Similar to PP2A13: F-box protein PP2-A13 (Arabidopsis thaliana)Scaffold_7-View
AH018685Similar to P2A12: F-box protein PP2-A12 (Arabidopsis thaliana)Scaffold_12+View

Arachis ipaensis

Gene id Description Chromosome Strand Multiplicon
Araip.DKH8UF-box protein PP2-A13Araip.B05+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G63090phloem protein 2-A11 phloem protein 2-A11 (PP2-A11)%3B FUNCTIONS IN: carbohydrate binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1)%3B Has 461 Blast hits to 455 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 461%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr1-View
AT1G12710phloem protein 2-A12 This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber%2C suggesting that this protein could potentially have carbohydrate binding capabilities. phloem protein 2-A12 (PP2-A12)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A11 (TAIR:AT1G63090.1)%3B Has 458 Blast hits to 452 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 456%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr1-View
AT5G52120phloem protein 2-A14 phloem protein 2-A14 (PP2-A14)%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: phloem protein 2-A13 (TAIR:AT3G61060.1)%3B Has 417 Blast hits to 411 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 417%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).Chr5-View

Brassica oleracea

Gene id Description Chromosome Strand Multiplicon
Bo5g016700phloem protein 2-A12C5+View
Bo9g028840No description available.C9-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
Brara.I01411No description available.A09+View
Brara.F00840No description available.A06+View

Capsicum annuum

Gene id Description Chromosome Strand Multiplicon
CAN.G981.31No description available.PGAv.1.6.scaffold981+View

Cicer arietinum

Gene id Description Chromosome Strand Multiplicon
Ca_02411.gNo description available.Ca8+View
Ca_08737.gNo description available.Ca1+View

Coffea canephora

Gene id Description Chromosome Strand Multiplicon
Cc02_g03350F-box protein PP2-A13chr2+View
Cc08_g14040F-box protein PP2-A12chr8-View

Citrus clementina

Gene id Description Chromosome Strand Multiplicon
Ciclev10021489m.gNo description available.scaffold_3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
MELO3C006145No description available.CM3.5_scaffold00006+View

Chenopodium quinoa

Gene id Description Chromosome Strand Multiplicon
AUR62016023PP2A13: F-box protein PP2-A13C_Quinoa_Scaffold_3256+View
AUR62017289P2A12: F-box protein PP2-A12C_Quinoa_Scaffold_3489+View
AUR62010648P2A12: F-box protein PP2-A12C_Quinoa_Scaffold_1280+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
Carubv10009895m.gNo description available.scaffold_1-View
Carubv10027209m.gNo description available.scaffold_8-View

Cucumis sativus L.

Gene id Description Chromosome Strand Multiplicon
Cucsa.258060No description available.scaffold02229-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FVE32388No description available.LG5-View
FVE13312No description available.LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
Glyma.17G131400No description available.Chr17+View
Glyma.16G197800No description available.Chr16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
Gorai.004G208300No description available.Chr04-View
Gorai.008G279800No description available.Chr08+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
Manes.06G144300No description available.Chromosome06-View
Manes.02G027400No description available.Chromosome02+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
Medtr4g102770F-box protein PP2-A13chr4-View
Medtr5g010800F-box protein PP2-A13chr5+View

Nelumbo nucifera

Gene id Description Chromosome Strand Multiplicon
NNU_08210F-box protein PP2-A13megascaffold_2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g02550OsFBX76 - F-box domain containing protein, expressedChr3+View

Petunia axillaris

Gene id Description Chromosome Strand Multiplicon
Peaxi162Scf00714g00617F-box protein PP2-A13Peaxi162Scf00714+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
Prupe.5G091600No description available.Pp05-View
Prupe.2G290600No description available.Pp02-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.001G109800No description available.Chr01+View
Potri.003G121900F-box family protein; similar to SKP1 interacting partner 3-related; [ co-ortholog (2of2) of At1g12710, At1g63090, ]Chr03-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RCO.g.30147.000572ATPP2-A13, putative30147+View
RCO.g.30190.000365ATPP2-A13, putative30190-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc08g080360.2F-box protein PP2-B1 (AHRD V1 ***- PP2B1_ARATH); contains Interpro domain(s) IPR001810 Cyclin-like F-boxSL2.50ch08-View

Schrenkiella parvula

Gene id Description Chromosome Strand Multiplicon
Tp1g11290AtPP2-A12 (Phloem protein 2-A12)ch1-1-View
Tp2g01500AtPP2-A11 (Phloem protein 2-A11)ch2-1+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
PGSC0003DMG400014315F-box family proteinST4.03ch03-View
PGSC0003DMG400022762F-box family proteinST4.03ch08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCA.TCM_015102Phloem protein 2-A13NC_023623.1-View
TCA.TCM_016185Phloem protein 2-A12%2C putativeNC_023623.1-View

Tarenaya hassleriana

Gene id Description Chromosome Strand Multiplicon
THA.LOC104809420F-box protein PP2-A12-likeNW_010965019.1+View
THA.LOC104818197F-box protein PP2-A12-likeNW_010960187.1+View
THA.LOC104823575F-box protein PP2-A12-likeNW_010966881.1-View

Ziziphus jujuba

Gene id Description Chromosome Strand Multiplicon
ZJU.LOC107414433F-box protein PP2-A14NC_029681.1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
Zm00001d002624RING/U-box superfamily protein2-View


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Gene id
Species
Description
Chromosome
Strand