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Integrative Orthology Viewer:
Pp3c3_22310
(Physcomitrium patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrium patens | Orthologous gene family | Pp3c3_22310 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | Pp3c3_22310 | 1 | ||
| Tree-based ortholog | Pp3c3_22310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Actinidia chinensis | Orthologous gene family | 1-to-many | Achn062601 Achn147951 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Achn062601 | 1 | ||
| Tree-based ortholog | 1-to-many | Achn062601 Achn147951 | 2 | ||
| Amaranthus hypochondriacus | Orthologous gene family | 1-to-1 | AH020231 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AH020231 | 1 | ||
| Tree-based ortholog | 1-to-1 | AH020231 | 1 | ||
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR1127G027 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR1127G027 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR1127G027 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G38590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G38590 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G38590 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G40730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G40730 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G40730 | 1 | ||
| Arachis ipaensis | Orthologous gene family | 1-to-1 | Araip.KB1X8 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Araip.KB1X8 | 1 | ||
| Tree-based ortholog | 1-to-1 | Araip.KB1X8 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | Bv_009560_jkhx | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bv_009560_jkhx | 1 | ||
| Tree-based ortholog | 1-to-1 | Bv_009560_jkhx | 1 | ||
| Brassica oleracea | Orthologous gene family | 1-to-many | Bo3g035120 Bo4g190370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bo3g035120 | 1 | ||
| Tree-based ortholog | 1-to-many | Bo3g035120 Bo4g190370 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | Brara.C02088 Brara.D02481 Brara.E00184 | 3 | |
| Tree-based ortholog | 1-to-many | Brara.C02088 Brara.D02481 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Brara.D02481 | 1 | ||
| Cajanus cajan | Orthologous gene family | 1-to-many | C.cajan_07033.g C.cajan_29150.g | 2 | |
| Tree-based ortholog | 1-to-many | C.cajan_07033.g C.cajan_29150.g | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | C.cajan_29150.g | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | Carubv10022662m.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Carubv10022662m.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Carubv10022662m.g | 1 | ||
| Capsicum annuum | Orthologous gene family | 1-to-1 | CAN.G203.55 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CAN.G203.55 | 1 | ||
| Tree-based ortholog | 1-to-1 | CAN.G203.55 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-many | Cpa.g.sc19.46 Cpa.g.sc19.47 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cpa.g.sc19.46 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cpa.g.sc19.46 | 1 | ||
| Chenopodium quinoa | Orthologous gene family | 1-to-many | AUR62037781 AUR62042224 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AUR62037781 | 1 | ||
| Tree-based ortholog | 1-to-many | AUR62037781 AUR62042224 | 2 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | Cre13.g575300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre13.g575300 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cre13.g575300 | 1 | ||
| Cicer arietinum | Orthologous gene family | 1-to-1 | Ca_03821.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Ca_03821.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Ca_03821.g | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | Cla010521.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cla010521.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Cla010521.g | 1 | ||
| Citrus clementina | Orthologous gene family | 1-to-1 | Ciclev10030740m.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Ciclev10030740m.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Ciclev10030740m.g | 1 | ||
| Coffea canephora | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cc10_g16340 | 1 | |
| Corchorus olitorius | Orthologous gene family | 1-to-1 | COL.COLO4_19461 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | COL.COLO4_19461 | 1 | ||
| Tree-based ortholog | 1-to-1 | COL.COLO4_19461 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | MELO3C022651 MELO3C022652 MELO3C026565 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MELO3C022652 | 1 | ||
| Tree-based ortholog | 1-to-1 | MELO3C022652 | 1 | ||
| Cucumis sativus L. | Orthologous gene family | 1-to-1 | Cucsa.149620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cucsa.149620 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cucsa.149620 | 1 | ||
| Daucus carota | Orthologous gene family | 1-to-many | DCAR_005879 DCAR_005880 DCAR_007356 | 3 | |
| Tree-based ortholog | 1-to-many | DCAR_005879 DCAR_007356 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | DCAR_007356 | 1 | ||
| Erythranthe guttata | Orthologous gene family | 1-to-1 | Migut.F00574 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Migut.F00574 | 1 | ||
| Tree-based ortholog | 1-to-1 | Migut.F00574 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | Eucgr.J00108 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Eucgr.J00108 | 1 | ||
| Tree-based ortholog | 1-to-1 | Eucgr.J00108 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FVE00785 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FVE00785 | 1 | ||
| Tree-based ortholog | 1-to-1 | FVE00785 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | Glyma.09G252000 Glyma.10G170400 Glyma.18G240600 ... | 5 | |
| Tree-based ortholog | 1-to-many | Glyma.09G252000 Glyma.18G240600 Glyma.20G219600 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Glyma.20G219600 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | Gorai.009G292700 Gorai.010G219100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Gorai.009G292700 | 1 | ||
| Tree-based ortholog | 1-to-many | Gorai.009G292700 Gorai.010G219100 | 2 | ||
| Hevea brasiliensis | Orthologous gene family | 1-to-many | HBR0224G021 HBR0959G055 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HBR0224G021 HBR0959G055 | 2 | ||
| Tree-based ortholog | 1-to-many | HBR0224G021 HBR0959G055 | 2 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MDO.mRNA.g.1139.49 MDO.mRNA.g.413.14 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MDO.mRNA.g.1139.49 | 1 | ||
| Tree-based ortholog | 1-to-many | MDO.mRNA.g.1139.49 MDO.mRNA.g.413.14 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | Manes.07G142600 Manes.10G002000 | 2 | |
| Tree-based ortholog | 1-to-many | Manes.07G142600 Manes.10G002000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Manes.10G002000 | 1 | ||
| Marchantia polymorpha | Orthologous gene family | 1-to-many | Mapoly0025s0051 Mapoly0025s0052 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0025s0051 | 1 | ||
| Tree-based ortholog | 1-to-1 | Mapoly0025s0051 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | Medtr1g078330 Medtr1g078370 Medtr6g086565 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Medtr6g086565 | 1 | ||
| Tree-based ortholog | 1-to-1 | Medtr6g086565 | 1 | ||
| Micromonas commoda | Orthologous gene family | 1-to-1 | MCO06G273 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO06G273 | 1 | ||
| Tree-based ortholog | 1-to-1 | MCO06G273 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | LOC_Os01g60440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os01g60440 | 1 | ||
| Tree-based ortholog | 1-to-1 | LOC_Os01g60440 | 1 | ||
| Petunia axillaris | Orthologous gene family | 1-to-1 | Peaxi162Scf00739g00425 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Peaxi162Scf00739g00425 | 1 | ||
| Tree-based ortholog | 1-to-1 | Peaxi162Scf00739g00425 | 1 | ||
| Picea abies | Orthologous gene family | 1-to-many | PAB00002226 PAB00006578 PAB00018037 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00006578 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | Potri.013G090500 Potri.019G059200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.013G090500 Potri.019G059200 | 2 | ||
| Tree-based ortholog | 1-to-many | Potri.013G090500 Potri.019G059200 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | Prupe.1G349800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Prupe.1G349800 | 1 | ||
| Tree-based ortholog | 1-to-1 | Prupe.1G349800 | 1 | ||
| Pyrus bretschneideri | Orthologous gene family | 1-to-1 | Pbr012265.1.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Pbr012265.1.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Pbr012265.1.g | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RCO.g.29729.000104 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RCO.g.29729.000104 | 1 | ||
| Tree-based ortholog | 1-to-1 | RCO.g.29729.000104 | 1 | ||
| Schrenkiella parvula | Orthologous gene family | 1-to-1 | Tp4g23040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Tp4g23040 | 1 | ||
| Tree-based ortholog | 1-to-1 | Tp4g23040 | 1 | ||
| Selaginella moellendorffii | Orthologous gene family | 1-to-many | SMO199G0006 SMO361G0532 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SMO199G0006 | 1 | ||
| Tree-based ortholog | 1-to-many | SMO199G0006 SMO361G0312 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | Solyc05g052200.2 Solyc06g048890.2 | 2 | |
| Tree-based ortholog | 1-to-many | Solyc05g052200.2 Solyc06g048890.2 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc06g048890.2 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | PGSC0003DMG400008777 PGSC0003DMG400011657 PGSC0003DMG400016657 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PGSC0003DMG400008777 | 1 | ||
| Tarenaya hassleriana | Orthologous gene family | 1-to-many | THA.LOC104814068 THA.LOC104824367 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | THA.LOC104814068 THA.LOC104824367 | 2 | ||
| Tree-based ortholog | 1-to-many | THA.LOC104814068 THA.LOC104824367 | 2 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TCA.TCM_045553 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TCA.TCM_045553 | 1 | ||
| Tree-based ortholog | 1-to-1 | TCA.TCM_045553 | 1 | ||
| Trifolium pratense | Orthologous gene family | 1-to-many | TPR.G12571 TPR.G12602 TPR.G35277 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TPR.G35277 | 1 | ||
| Tree-based ortholog | 1-to-1 | TPR.G35277 | 1 | ||
| Utricularia gibba | Orthologous gene family | 1-to-1 | UGI.Scf00464.16257 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | UGI.Scf00464.16257 | 1 | ||
| Tree-based ortholog | 1-to-1 | UGI.Scf00464.16257 | 1 | ||
| Vigna radiata var. radiata | Orthologous gene family | 1-to-many | Vradi04g07620 Vradi08g13850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Vradi04g07620 | 1 | ||
| Tree-based ortholog | 1-to-many | Vradi04g07620 Vradi08g13850 | 2 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | GSVIVG01013623001 GSVIVG01032663001 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01032663001 | 1 | ||
| Tree-based ortholog | 1-to-1 | GSVIVG01032663001 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | Zm00001d012511 Zm00001d043067 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Zm00001d012511 Zm00001d043067 | 2 | ||
| Tree-based ortholog | 1-to-many | Zm00001d012511 Zm00001d043067 | 2 | ||
| Ziziphus jujuba | Orthologous gene family | 1-to-1 | ZJU.LOC107412432 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZJU.LOC107412432 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZJU.LOC107412432 | 1 |