Integrative Orthology Viewer: PGSC0003DMG400037344 (Solanum tuberosum) top


Inparalogs

Organism Source Genes #genes Details
Solanum tuberosumOrthologous gene familyPGSC0003DMG400001408 PGSC0003DMG400004993 PGSC0003DMG400008131 ...13
Anchor pointPGSC0003DMG400012415 PGSC0003DMG400025040 2
Best-Hits-and-Inparalogs(BHI)familyPGSC0003DMG400037344 1
Tree-based orthologPGSC0003DMG400037344 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn012261 Achn051271 Achn058481 ...10
Tree-based ortholog1-to-manyAchn012261 Achn051271 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Achn051271 1
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH008062 AH010058 AH012801 ...9
Anchor pointmany-to-1AH008062 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AH008062 1
Tree-based ortholog1-to-manyAH008062 AH010058 2
Amborella trichopodaOrthologous gene familymany-to-manyATR0001G019 ATR0001G048 ATR0322G064 ...9
Anchor pointmany-to-1ATR0737G070 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0737G070 1
Tree-based ortholog1-to-1ATR0737G070 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G13030 AL1G61460 AL3G13490 ...10
Anchor pointmany-to-manyAL1G61460 AL3G27750 AL7G25290 3
Tree-based ortholog1-to-manyAL1G61460 AL3G27750 AL7G25290 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AL7G25290 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G03520 AT1G53100 AT2G37585 ...10
Anchor pointmany-to-manyAT1G53100 AT3G15350 AT4G27480 3
Tree-based ortholog1-to-manyAT1G53100 AT3G15350 AT4G27480 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AT4G27480 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.3R43V Araip.A73F2 Araip.BT12Y ...12
Anchor pointmany-to-1Araip.BT12Y 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.BT12Y 1
Tree-based ortholog1-to-manyAraip.BT12Y Araip.FG0YW 2
Beta vulgarisOrthologous gene familymany-to-manyBv2_040610_xwtt Bv4_093200_hwsr Bv4_096670_qjqs ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv4_096670_qjqs 1
Tree-based ortholog1-to-1Bv4_096670_qjqs 1
Brassica oleraceaOrthologous gene familymany-to-manyBo1g049410 Bo1g099960 Bo1g128590 ...16
Anchor pointmany-to-manyBo1g049410 Bo1g128590 Bo6g031130 3
Tree-based ortholog1-to-manyBo1g049410 Bo1g128590 Bo6g031130 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo8g052790 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A01718 Brara.A02591 Brara.A03145 ...15
Anchor pointmany-to-manyBrara.A01718 Brara.A03145 Brara.E02609 ...4
Tree-based ortholog1-to-manyBrara.A01718 Brara.A03145 Brara.E02609 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.H01514 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_01859.g C.cajan_06072.g C.cajan_08215.g ...11
Tree-based ortholog1-to-manyC.cajan_13859.g C.cajan_35041.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_35041.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10000946m.g Carubv10000991m.g Carubv10004902m.g ...10
Anchor pointmany-to-manyCarubv10004902m.g Carubv10011618m.g Carubv10015665m.g 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10004902m.g 1
Tree-based ortholog1-to-manyCarubv10004902m.g Carubv10011618m.g Carubv10015665m.g 3
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1110.59 CAN.G1119.25 CAN.G1146.2 ...15
Anchor pointmany-to-1CAN.G162.55 1
Best-Hits-and-Inparalogs(BHI)family1-to-1CAN.G162.55 1
Tree-based ortholog1-to-1CAN.G798.65 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc1305.1 Cpa.g.sc14.55 Cpa.g.sc161.40 ...9
Anchor pointmany-to-1Cpa.g.sc80.66 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc80.66 1
Tree-based ortholog1-to-1Cpa.g.sc80.66 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62011125 AUR62013366 AUR62018306 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62019430 AUR62039205 2
Tree-based ortholog1-to-manyAUR62019430 AUR62039205 2
Cicer arietinumOrthologous gene familymany-to-manyCa_06662.g Ca_06864.g Ca_08189.g ...7
Anchor pointmany-to-1Ca_06864.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_06864.g 1
Tree-based ortholog1-to-1Ca_06864.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla000342.g Cla004297.g Cla007729.g ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla004297.g 1
Tree-based ortholog1-to-manyCla004297.g Cla023383.g 2
Anchor pointmany-to-manyCla023383.g Cla011791.g 2
Citrus clementinaOrthologous gene familymany-to-manyCiclev10004926m.g Ciclev10008397m.g Ciclev10008455m.g ...7
Anchor pointmany-to-1Ciclev10008455m.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10008455m.g 1
Tree-based ortholog1-to-1Ciclev10008455m.g 1
Coffea canephoraOrthologous gene familymany-to-manyCc03_g07090 Cc05_g06500 Cc05_g11990 ...7
Anchor pointmany-to-1Cc05_g11990 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cc05_g11990 1
Tree-based ortholog1-to-1Cc05_g11990 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_05722 COL.COLO4_07521 COL.COLO4_13693 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_27175 1
Tree-based ortholog1-to-1COL.COLO4_27175 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C004511 MELO3C006345 MELO3C008869 ...10
Anchor pointmany-to-manyMELO3C016697 MELO3C016510 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C016697 1
Tree-based ortholog1-to-manyMELO3C016697 MELO3C019410 2
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.032560 Cucsa.069780 Cucsa.123130 ...8
Tree-based ortholog1-to-manyCucsa.032560 Cucsa.123130 2
Anchor pointmany-to-manyCucsa.123130 Cucsa.074790 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.123130 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_002281 DCAR_002282 DCAR_009236 ...14
Anchor pointmany-to-manyDCAR_013110 DCAR_017138 DCAR_020990 ...4
Tree-based ortholog1-to-manyDCAR_013110 DCAR_017138 DCAR_019556 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1DCAR_013971 1
Erythranthe guttataOrthologous gene familymany-to-manyMigut.H00883 Migut.H01942 Migut.J00339 ...8
Anchor pointmany-to-manyMigut.H01942 Migut.M00805 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.H01942 1
Tree-based ortholog1-to-manyMigut.H01942 Migut.M00805 2
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.A01787 Eucgr.A02143 Eucgr.A02896 ...8
Anchor pointmany-to-1Eucgr.F01131 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.F01131 1
Tree-based ortholog1-to-1Eucgr.F01131 1
Fragaria vescaOrthologous gene familymany-to-manyFVE01296 FVE10276 FVE17150 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE17150 1
Tree-based ortholog1-to-1FVE17150 1
Glycine maxOrthologous gene familymany-to-manyGlyma.03G083000 Glyma.04G148100 Glyma.06G222700 ...23
Anchor pointmany-to-manyGlyma.06G240700 Glyma.12G224700 Glyma.13G276600 3
Tree-based ortholog1-to-manyGlyma.06G240700 Glyma.12G155800 Glyma.12G224700 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyGlyma.12G224700 Glyma.13G276600 2
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.002G017200 Gorai.002G069800 Gorai.004G277100 ...15
Anchor pointmany-to-manyGorai.002G069800 Gorai.007G323000 Gorai.013G168800 3
Tree-based ortholog1-to-manyGorai.002G069800 Gorai.007G323000 Gorai.013G168800 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.007G323000 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0152G003 HBR0744G088 HBR1918G071 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1HBR0744G088 1
Tree-based ortholog1-to-1HBR0744G088 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1221.56 MDO.mRNA.g.134.10 MDO.mRNA.g.1697.10 ...12
Tree-based ortholog1-to-1MDO.mRNA.g.134.10 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.78.43 1
Manihot esculentaOrthologous gene familymany-to-manyManes.03G109700 Manes.06G048700 Manes.08G152600 ...9
Anchor pointmany-to-manyManes.03G109700 Manes.15G087300 2
Tree-based ortholog1-to-manyManes.03G109700 Manes.15G087300 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.15G087300 1
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0094s0068 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0094s0068 1
Tree-based ortholog1-to-1Mapoly0094s0068 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr0072s0020 Medtr0662s0030 Medtr1g046740 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr2g085300 1
Tree-based ortholog1-to-1Medtr2g085300 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_07161 NNU_09321 NNU_11125 ...11
Anchor pointmany-to-manyNNU_11125 NNU_25981 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_11125 NNU_25981 2
Tree-based ortholog1-to-manyNNU_11125 NNU_25981 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g10440 LOC_Os03g16890 LOC_Os03g48560 ...7
Tree-based ortholog1-to-1LOC_Os01g10440 1
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os06g40060 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00000g03914 Peaxi162Scf00027g02210 Peaxi162Scf00045g00328 ...11
Anchor pointmany-to-manyPeaxi162Scf00000g03914 Peaxi162Scf00027g02210 Peaxi162Scf00069g01511 3
Tree-based ortholog1-to-1Peaxi162Scf00000g03914 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00069g01511 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c10_2430 Pp3c14_2510 Pp3c17_12000 ...7
Tree-based ortholog1-to-manyPp3c10_2430 Pp3c14_2510 Pp3c17_12000 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c17_12000 Pp3c19_19350 2
Picea abiesOrthologous gene familymany-to-manyPAB00003003 PAB00013717 PAB00015427 ...7
Tree-based ortholog1-to-manyPAB00013717 PAB00015427 PAB00022544 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00025501 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G053800 Potri.001G399500 Potri.004G130300 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.001G399500 Potri.011G119600 2
Tree-based ortholog1-to-manyPotri.001G399500 Potri.011G119600 2
Anchor pointmany-to-1Potri.011G119600 1
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G057400 Prupe.3G232800 Prupe.3G273700 ...7
Anchor pointmany-to-1Prupe.4G180700 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.4G180700 1
Tree-based ortholog1-to-1Prupe.4G180700 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr003181.1.g Pbr006024.1.g Pbr010622.1.g ...13
Anchor pointmany-to-1Pbr017417.1.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Pbr017417.1.g 1
Tree-based ortholog1-to-manyPbr017417.1.g Pbr038315.1.g 2
Ricinus communisOrthologous gene familymany-to-manyRCO.g.27755.000001 RCO.g.28320.000049 RCO.g.29822.000124 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.27755.000001 1
Tree-based ortholog1-to-1RCO.g.27755.000001 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g02450 Tp1g39650 Tp3g02660 ...10
Anchor pointmany-to-manyTp1g39650 Tp3g13530 Tp7g25420 3
Tree-based ortholog1-to-manyTp1g39650 Tp3g13530 Tp7g25420 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp7g25420 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO351G0567 SMO367G0106 2
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO351G0567 1
Tree-based ortholog1-to-manySMO351G0567 SMO367G0106 2
Solanum lycopersicumOrthologous gene familymany-to-manySolyc00g024670.1 Solyc02g087550.2 Solyc03g077910.2 ...13
Anchor pointmany-to-manySolyc07g063110.2 Solyc10g007040.2 Solyc12g013850.1 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc12g013850.1 1
Tree-based ortholog1-to-1Solyc12g013850.1 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104804821 THA.LOC104808014 THA.LOC104808993 ...10
Anchor pointmany-to-manyTHA.LOC104810467 THA.LOC104811862 2
Best-Hits-and-Inparalogs(BHI)family1-to-1THA.LOC104810467 1
Tree-based ortholog1-to-manyTHA.LOC104810467 THA.LOC104811862 2
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_007967 TCA.TCM_018321 TCA.TCM_020430 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_031519 1
Tree-based ortholog1-to-1TCA.TCM_031519 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G10730 TPR.G11289 TPR.G20560 ...11
Anchor pointmany-to-1TPR.G38978 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G38978 1
Tree-based ortholog1-to-1TPR.G38978 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00003.643 UGI.Scf00018.2374 UGI.Scf00048.5008 ...8
Anchor pointmany-to-manyUGI.Scf00003.643 UGI.Scf00118.8719 2
Tree-based ortholog1-to-manyUGI.Scf00003.643 UGI.Scf00118.8719 UGI.Scf00140.9502 3
Best-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf00118.8719 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi0007s02060 Vradi01g01560 Vradi01g08040 ...12
Tree-based ortholog1-to-manyVradi02g10340 Vradi0303s00090 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi0303s00090 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01014331001 GSVIVG01015525001 GSVIVG01020106001 ...8
Anchor pointmany-to-1GSVIVG01014331001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01014331001 1
Tree-based ortholog1-to-1GSVIVG01014331001 1
Zea maysOrthologous gene familymany-to-manyZm00001d020473 Zm00001d024646 Zm00001d027646 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d039426 1
Tree-based ortholog1-to-1Zm00001d039426 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107415604 ZJU.LOC107416763 ZJU.LOC107422442 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1ZJU.LOC107422442 1
Tree-based ortholog1-to-1ZJU.LOC107422442 1
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