Integrative Orthology Viewer: LOC_Os10g36400 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g10680 LOC_Os01g60850 LOC_Os03g61040 ...9
Best-Hits-and-Inparalogs(BHI)familyLOC_Os10g36400 1
Tree-based orthologLOC_Os10g36400 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn010591 Achn088211 Achn124751 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Achn088211 1
Tree-based ortholog1-to-1Achn088211 1
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH001181 AH001183 AH003253 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1AH009148 1
Tree-based ortholog1-to-1AH009148 1
Amborella trichopodaOrthologous gene familymany-to-manyATR0618G296 ATR0618G350 ATR0681G385 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR1152G107 1
Tree-based ortholog1-to-1ATR1152G107 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G43090 AL1G61870 AL3G27190 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1AL5G42990 1
Tree-based ortholog1-to-1AL5G42990 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G29300 AT1G53380 AT2G30380 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1AT3G60680 1
Tree-based ortholog1-to-1AT3G60680 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.18QNQ Araip.252Y0 Araip.7F1S1 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.YD8WA 1
Tree-based ortholog1-to-1Araip.YD8WA 1
Beta vulgarisOrthologous gene familymany-to-manyBv1_018690_xeqg Bv1_018890_emiw Bv4_085500_txws ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv1_018690_xeqg 1
Tree-based ortholog1-to-1Bv1_018690_xeqg 1
Brassica oleraceaOrthologous gene familymany-to-manyBo24817s010 Bo3g037680 Bo3g066460 ...16
Anchor pointN/ABo4g104860 1
Tree-based ortholog1-to-manyBo4g104860 Bo8g095380 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo8g095380 1
Brassica rapaOrthologous gene familymany-to-manyBrara.C02292 Brara.C03546 Brara.E00489 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.I04187 1
Tree-based ortholog1-to-1Brara.I04187 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_02841.g C.cajan_05451.g C.cajan_15180.g ...8
Best-Hits-and-Inparalogs(BHI)family1-to-manyC.cajan_20570.g C.cajan_45955.g 2
Tree-based ortholog1-to-manyC.cajan_20570.g C.cajan_45955.g 2
Capsella rubellaOrthologous gene familymany-to-manyCarubv10009111m.g Carubv10011192m.g Carubv10013646m.g ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10019349m.g 1
Tree-based ortholog1-to-1Carubv10019349m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G103.16 CAN.G106.22 CAN.G375.24 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1CAN.G106.22 1
Tree-based ortholog1-to-1CAN.G106.22 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc112.79 Cpa.g.sc145.2 Cpa.g.sc2.318 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc145.2 1
Tree-based ortholog1-to-1Cpa.g.sc145.2 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62001705 AUR62004174 AUR62004188 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62004174 AUR62013673 2
Tree-based ortholog1-to-manyAUR62004174 AUR62013673 2
Cicer arietinumOrthologous gene familymany-to-manyCa_08618.g Ca_12907.g Ca_15585.g ...5
Tree-based ortholog1-to-manyCa_08618.g Ca_12907.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_22620.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla005373.g Cla006658.g Cla009710.g ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla006658.g 1
Tree-based ortholog1-to-1Cla006658.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10003584m.g Ciclev10015165m.g Ciclev10019751m.g ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10019751m.g 1
Tree-based ortholog1-to-1Ciclev10019751m.g 1
Coffea canephoraOrthologous gene familymany-to-manyCc00_g13840 Cc01_g13720 Cc01_g15200 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Cc00_g13840 1
Tree-based ortholog1-to-1Cc00_g13840 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_11195 COL.COLO4_12511 COL.COLO4_12524 ...6
Tree-based ortholog1-to-1COL.COLO4_12511 1
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_12524 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C006205 MELO3C007196 MELO3C016124 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C021152 1
Tree-based ortholog1-to-1MELO3C021152 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.047140 Cucsa.057770 Cucsa.120550 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.120550 1
Tree-based ortholog1-to-1Cucsa.120550 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_003979 DCAR_005148 DCAR_008549 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1DCAR_031516 1
Tree-based ortholog1-to-1DCAR_031516 1
Erythranthe guttataOrthologous gene familymany-to-manyMigut.B01606 Migut.H01408 Migut.H02004 ...8
Anchor pointN/AMigut.B01606 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.B01606 1
Tree-based ortholog1-to-1Migut.B01606 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.A00953 Eucgr.B01067 Eucgr.B02281 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.E01476 1
Tree-based ortholog1-to-1Eucgr.E01476 1
Fragaria vescaOrthologous gene familymany-to-manyFVE03918 FVE03941 FVE07960 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE03941 1
Tree-based ortholog1-to-1FVE03941 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G078400 Glyma.01G138800 Glyma.02G235400 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-manyGlyma.01G078400 Glyma.U013400 2
Tree-based ortholog1-to-manyGlyma.01G078400 Glyma.U013400 2
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.002G050200 Gorai.004G040500 Gorai.004G041100 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyGorai.004G040500 Gorai.004G041100 2
Tree-based ortholog1-to-manyGorai.004G040500 Gorai.004G041100 2
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0226G002 HBR1118G003 HBR1467G005 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1HBR0226G002 1
Tree-based ortholog1-to-manyHBR0226G002 HBR3416G028 2
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1542.3 MDO.mRNA.g.2193.6 MDO.mRNA.g.2193.7 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.2234.1 1
Tree-based ortholog1-to-1MDO.mRNA.g.3103.2 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G165400 Manes.01G267500 Manes.01G268200 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.01G268200 1
Tree-based ortholog1-to-manyManes.01G268200 Manes.05G048100 2
Medicago truncatulaOrthologous gene familymany-to-manyMedtr0178s0030 Medtr2g075910 Medtr3g462150 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr0178s0030 1
Tree-based ortholog1-to-1Medtr0178s0030 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_01864 NNU_03743 NNU_03745 ...13
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_14543 NNU_18247 2
Tree-based ortholog1-to-manyNNU_14543 NNU_18247 2
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00013g00304 Peaxi162Scf00111g00148 Peaxi162Scf00202g00189 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00959g00013 1
Tree-based ortholog1-to-1Peaxi162Scf00959g00013 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c14_7530 Pp3c14_8760 Pp3c16_21860 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c14_7530 Pp3c14_8760 Pp3c1_34000 ...5
Tree-based ortholog1-to-1Pp3c4_32300 1
Picea abiesOrthologous gene familymany-to-manyPAB00013640 PAB00013641 PAB00013642 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00018675 PAB00025771 2
Tree-based ortholog1-to-manyPAB00018675 PAB00025771 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G248000 Potri.001G387700 Potri.002G145000 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.002G145000 Potri.014G066600 2
Tree-based ortholog1-to-manyPotri.002G145000 Potri.014G066600 2
Prunus persicaOrthologous gene familymany-to-manyPrupe.2G140200 Prupe.2G141900 Prupe.4G067400 ...6
Anchor pointN/APrupe.2G140200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.2G140200 1
Tree-based ortholog1-to-1Prupe.2G140200 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr000531.1.g Pbr010063.1.g Pbr013121.1.g ...11
Best-Hits-and-Inparalogs(BHI)family1-to-manyPbr018491.1.g Pbr041137.1.g 2
Tree-based ortholog1-to-manyPbr018491.1.g Pbr041137.1.g 2
Ricinus communisOrthologous gene familymany-to-manyRCO.g.27894.000021 RCO.g.29751.000018 RCO.g.29804.000004 ...6
Anchor pointN/ARCO.g.30174.000235 1
Tree-based ortholog1-to-1RCO.g.30174.000235 1
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.30174.000248 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g25240 Tp1g39930 Tp3g13080 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp5g02560 1
Tree-based ortholog1-to-1Tp5g02560 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO011G0018 SMO358G0687 2
Best-Hits-and-Inparalogs(BHI)family1-to-manySMO011G0018 SMO358G0687 2
Tree-based ortholog1-to-manySMO011G0018 SMO358G0687 2
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g091120.2 Solyc02g072140.1 Solyc02g083110.1 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc05g050930.1 1
Tree-based ortholog1-to-1Solyc05g050930.1 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400001576 PGSC0003DMG400007067 PGSC0003DMG400015390 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG402007021 1
Tree-based ortholog1-to-1PGSC0003DMG402007021 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104799408 THA.LOC104802461 THA.LOC104810433 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-manyTHA.LOC104802461 THA.LOC104817226 2
Tree-based ortholog1-to-manyTHA.LOC104802461 THA.LOC104817226 2
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_005537 TCA.TCM_005551 TCA.TCM_029641 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_005551 1
Tree-based ortholog1-to-1TCA.TCM_005551 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G16068 TPR.G16492 TPR.G25739 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G39038 1
Tree-based ortholog1-to-1TPR.G39038 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00017.2273 UGI.Scf00036.4081 UGI.Scf00038.4252 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf00045.4763 1
Tree-based ortholog1-to-1UGI.Scf00045.4763 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi0161s00110 Vradi0171s00230 Vradi0214s00190 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi0171s00230 1
Tree-based ortholog1-to-1Vradi0171s00230 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01014172001 GSVIVG01021261001 GSVIVG01024581001 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01014172001 1
Tree-based ortholog1-to-manyGSVIVG01014172001 GSVIVG01021261001 2
Zea maysOrthologous gene familymany-to-manyZm00001d010012 Zm00001d013896 Zm00001d023347 ...10
Anchor pointN/AZm00001d013896 Zm00001d032503 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyZm00001d013896 Zm00001d032503 2
Tree-based ortholog1-to-manyZm00001d013896 Zm00001d032503 2
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107405910 ZJU.LOC107408207 ZJU.LOC107410955 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyZJU.LOC107408207 ZJU.LOC107423865 2
Tree-based ortholog1-to-manyZJU.LOC107408207 ZJU.LOC107423865 2
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