Integrative Orthology Viewer: LOC_Os10g10560 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os04g01570 LOC_Os06g49760 LOC_Os08g24160 ...8
Best-Hits-and-Inparalogs(BHI)familyLOC_Os10g10560 LOC_Os10g10620 2
Tree-based orthologLOC_Os10g10560 LOC_Os10g10620 2

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn010601 Achn010991 Achn089491 ...18
Tree-based orthologmany-to-manyAchn010601 Achn010991 Achn089491 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyAchn173621 Achn284721 2
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH003223 AH009129 AH012208 ...10
Tree-based orthologmany-to-manyAH003223 AH009129 AH019457 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1AH014922 1
Amborella trichopodaOrthologous gene familymany-to-manyATR0564G060 ATR0564G230 ATR0564G469 ...6
Tree-based orthologmany-to-manyATR0564G230 ATR0564G469 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0665G568 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G26920 AL1G36920 AL2G13020 ...15
Best-Hits-and-Inparalogs(BHI)familymany-to-1AL1G36920 1
Tree-based orthologmany-to-manyAL2G13020 AL5G26570 AL6G47260 ...8
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G14890 AT1G23205 AT1G62760 ...15
Tree-based orthologmany-to-manyAT1G62770 AT3G47380 AT4G00080 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT2G01610 1
Arachis ipaensisOrthologous gene familymany-to-1Araip.MP34A 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Araip.MP34A 1
Tree-based orthologmany-to-1Araip.MP34A 1
Beta vulgarisOrthologous gene familymany-to-manyBv1_018880_okrm Bv3_055920_xsqm Bv3_056000_nmrx ...8
Tree-based orthologmany-to-manyBv1_018880_okrm Bv3_055920_xsqm Bv5_098090_gous 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bv6_144350_tscg 1
Brassica oleraceaOrthologous gene familymany-to-manyBo1g039940 Bo1g039950 Bo1g039970 ...32
Tree-based orthologmany-to-manyBo1g039970 Bo2g105010 Bo2g164070 ...11
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bo7g056250 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A01528 Brara.A01529 Brara.A01530 ...28
Tree-based orthologmany-to-manyBrara.A01530 Brara.B02719 Brara.B03810 ...11
Best-Hits-and-Inparalogs(BHI)familymany-to-1Brara.G00989 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_01562.g C.cajan_02585.g C.cajan_03981.g ...18
Tree-based orthologmany-to-manyC.cajan_01562.g C.cajan_20556.g C.cajan_20557.g ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-1C.cajan_15597.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10001965m.g Carubv10001980m.g Carubv10005764m.g ...14
Tree-based orthologmany-to-manyCarubv10001965m.g Carubv10005764m.g Carubv10018045m.g ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-1Carubv10011899m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1118.1 CAN.G1337.18 CAN.G1394.31 ...15
Tree-based orthologmany-to-manyCAN.G1337.18 CAN.G1394.31 CAN.G152.10 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyCAN.G152.10 CAN.G152.9 2
Carica papayaOrthologous gene familymany-to-manyCpa.g.c25723.3 Cpa.g.sc145.16 Cpa.g.sc29.107 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cpa.g.c25723.3 1
Tree-based orthologmany-to-manyCpa.g.sc145.16 Cpa.g.sc29.110 Cpa.g.sc3.304 3
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62002189 AUR62004187 AUR62007460 ...12
Tree-based orthologmany-to-manyAUR62004187 AUR62007460 AUR62013658 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1AUR62039539 1
Cicer arietinumOrthologous gene familymany-to-manyCa_02370.g Ca_03124.g Ca_10442.g ...9
Tree-based orthologmany-to-manyCa_02370.g Ca_23791.g 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ca_23791.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla003940.g Cla005681.g Cla006264.g ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cla003940.g 1
Tree-based orthologmany-to-manyCla006264.g Cla011550.g 2
Citrus clementinaOrthologous gene familymany-to-manyCiclev10005888m.g Ciclev10005926m.g Ciclev10005928m.g ...15
Tree-based orthologmany-to-manyCiclev10005928m.g Ciclev10005968m.g Ciclev10006502m.g ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ciclev10016684m.g 1
Coffea canephoraOrthologous gene familymany-to-manyCc02_g04100 Cc02_g04120 Cc02_g04130 ...8
Tree-based orthologmany-to-manyCc02_g04100 Cc02_g24160 Cc08_g13060 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cc11_g08170 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_12523 COL.COLO4_13090 COL.COLO4_13091 ...10
Tree-based orthologmany-to-manyCOL.COLO4_12523 COL.COLO4_14146 COL.COLO4_23896 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1COL.COLO4_13091 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C005291 MELO3C005566 MELO3C005567 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1MELO3C005291 1
Tree-based orthologmany-to-manyMELO3C005567 MELO3C006821 2
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.251550 Cucsa.251560 Cucsa.251580 ...6
Tree-based orthologmany-to-1Cucsa.251550 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cucsa.280230 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_004913 DCAR_007318 DCAR_008458 ...15
Tree-based orthologmany-to-manyDCAR_004913 DCAR_008548 DCAR_018095 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyDCAR_007318 DCAR_030247 2
Erythranthe guttataOrthologous gene familymany-to-manyMigut.A00864 Migut.A00865 Migut.B01613 ...14
Tree-based orthologmany-to-manyMigut.A00865 Migut.B01613 Migut.E00959 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-1Migut.L00413 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.A02882 Eucgr.A02883 Eucgr.B02943 ...15
Best-Hits-and-Inparalogs(BHI)familymany-to-1Eucgr.B02943 1
Tree-based orthologmany-to-manyEucgr.D02018 Eucgr.D02022 Eucgr.D02469 ...8
Fragaria vescaOrthologous gene familymany-to-manyFVE03920 FVE12923 FVE21256 ...9
Tree-based orthologmany-to-manyFVE03920 FVE21260 FVE32262 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1FVE32261 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G138600 Glyma.01G138700 Glyma.01G211300 ...21
Tree-based orthologmany-to-manyGlyma.01G138600 Glyma.01G211300 Glyma.03G028500 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Glyma.09G122000 1
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G017200 Gorai.002G175900 Gorai.003G106800 ...21
Tree-based orthologmany-to-manyGorai.003G114800 Gorai.007G090200 Gorai.008G238600 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Gorai.005G160200 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0140G048 HBR0140G063 HBR0140G089 ...17
Tree-based orthologmany-to-manyHBR0140G091 HBR2455G010 HBR2463G008 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1HBR2321G012 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1300.6 MDO.mRNA.g.1300.7 MDO.mRNA.g.1300.9 ...15
Tree-based orthologmany-to-1MDO.mRNA.g.737.4 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1MDO.mRNA.g.92.22 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G074800 Manes.01G074900 Manes.02G034700 ...21
Tree-based orthologmany-to-manyManes.01G074800 Manes.02G034700 Manes.05G047300 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Manes.15G132300 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr2g043560 Medtr3g008760 Medtr3g008820 ...18
Tree-based orthologmany-to-manyMedtr3g008820 Medtr3g008840 Medtr4g025550 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMedtr4g120825 Medtr4g120830 Medtr8g104765 3
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_05074 NNU_08281 NNU_11740 ...14
Best-Hits-and-Inparalogs(BHI)familymany-to-manyNNU_14560 NNU_14561 NNU_18232 3
Tree-based orthologmany-to-manyNNU_14567 NNU_18226 2
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00002g00042 Peaxi162Scf00013g00303 Peaxi162Scf00023g00102 ...16
Tree-based orthologmany-to-manyPeaxi162Scf00002g00042 Peaxi162Scf00013g00303 Peaxi162Scf00054g02318 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Peaxi162Scf00034g00202 1
Picea abiesOrthologous gene familymany-to-manyPAB00000288 PAB00011694 PAB00016281 ...19
Tree-based orthologmany-to-manyPAB00011694 PAB00016281 PAB00016283 ...14
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPAB00016281 PAB00016283 PAB00044920 ...5
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G119200 Potri.001G119300 Potri.002G145800 ...18
Tree-based orthologmany-to-manyPotri.002G145800 Potri.003G113700 Potri.012G127500 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPotri.008G132600 Potri.010G109300 2
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G330900 Prupe.2G141800 Prupe.2G279700 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Prupe.1G330900 1
Tree-based orthologmany-to-manyPrupe.2G141800 Prupe.2G279900 Prupe.5G076900 3
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr012743.1.g Pbr012744.1.g Pbr012745.1.g ...17
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPbr012744.1.g Pbr012746.1.g Pbr015759.1.g ...4
Tree-based orthologmany-to-manyPbr012748.1.g Pbr015761.1.g Pbr017528.1.g ...4
Ricinus communisOrthologous gene familymany-to-manyRCO.g.29656.000002 RCO.g.29692.000009 RCO.g.29739.000145 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-1RCO.g.29692.000009 1
Tree-based orthologmany-to-manyRCO.g.30147.000472 RCO.g.30174.000242 RCO.g.30174.000247 ...4
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g13330 Tp1g20670 Tp2g01870 ...15
Tree-based orthologmany-to-manyTp2g01870 Tp2g25520 Tp5g14510 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Tp5g25900 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g091100.2 Solyc01g091110.2 Solyc03g083660.1 ...16
Tree-based orthologmany-to-manySolyc01g091100.2 Solyc01g091110.2 Solyc06g034370.1 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc10g076730.1 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400001276 PGSC0003DMG400002898 PGSC0003DMG400004735 ...20
Tree-based orthologmany-to-manyPGSC0003DMG400001276 PGSC0003DMG400004735 PGSC0003DMG400010809 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1PGSC0003DMG400019123 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104799610 THA.LOC104808286 THA.LOC104809450 ...15
Tree-based orthologmany-to-manyTHA.LOC104809450 THA.LOC104813769 THA.LOC104817007 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1THA.LOC104823759 1
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_005539 TCA.TCM_010984 TCA.TCM_014946 ...14
Tree-based orthologmany-to-manyTCA.TCM_005539 TCA.TCM_014952 TCA.TCM_016049 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1TCA.TCM_010984 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G12545 TPR.G15126 TPR.G15131 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTPR.G15126 TPR.G7492 2
Tree-based orthologmany-to-manyTPR.G39078 TPR.G7593 2
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00020.2626 UGI.Scf00025.3141 UGI.Scf00030.3602 ...7
Tree-based orthologmany-to-manyUGI.Scf00020.2626 UGI.Scf00030.3602 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1UGI.Scf00987.22628 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi02g00500 Vradi05g01750 Vradi05g21880 ...8
Tree-based orthologmany-to-manyVradi07g07090 Vradi07g12810 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Vradi07g27890 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01018598001 GSVIVG01018604001 GSVIVG01018606001 ...5
Tree-based orthologmany-to-1GSVIVG01018598001 1
Best-Hits-and-Inparalogs(BHI)familymany-to-manyGSVIVG01018606001 GSVIVG01018607001 GSVIVG01018608001 3
Zea maysOrthologous gene familymany-to-manyZm00001d014757 Zm00001d024913 Zm00001d030035 ...6
Tree-based orthologmany-to-1Zm00001d030035 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d052935 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107406428 ZJU.LOC107406429 ZJU.LOC107406891 ...14
Tree-based orthologmany-to-manyZJU.LOC107406428 ZJU.LOC107406429 ZJU.LOC107406891 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1ZJU.LOC107429291 1
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