Integrative Orthology Viewer: LOC_Os09g20490 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os03g59450 LOC_Os07g10820 LOC_Os08g31670 ...9
Best-Hits-and-Inparalogs(BHI)familyLOC_Os09g20490 LOC_Os09g20500 2
Tree-based orthologLOC_Os09g20490 LOC_Os09g20500 2

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn200781 Achn230851 Achn387631 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Achn230851 1
Tree-based orthologmany-to-manyAchn230851 Achn387631 2
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH003545 AH005630 AH005995 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1AH003545 1
Tree-based orthologmany-to-manyAH003545 AH005996 AH008761 3
Amborella trichopodaOrthologous gene familymany-to-manyATR0564G490 ATR0733G180 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0564G490 1
Tree-based orthologmany-to-1ATR0564G490 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL2G38440 AL3G51930 AL3G51950 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1AL2G38440 1
Tree-based orthologmany-to-manyAL2G38440 AL6G20680 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G78130 AT2G18590 AT4G36790 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT1G78130 1
Tree-based orthologmany-to-manyAT1G78130 AT5G10190 2
Arachis ipaensisOrthologous gene familymany-to-manyAraip.776WX Araip.7JA3Q Araip.826U2 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Araip.826U2 1
Tree-based orthologmany-to-manyAraip.826U2 Araip.NWR2P Araip.T4YPX 3
Beta vulgarisOrthologous gene familymany-to-manyBv1_009360_unoc Bv6_135210_dfgz Bv6_135220_qpwq ...5
Tree-based orthologmany-to-manyBv1_009360_unoc Bv6_135210_dfgz Bv6_135220_qpwq ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manyBv6_135220_qpwq Bv6_135240_odyz 2
Brassica oleraceaOrthologous gene familymany-to-manyBo1g005390 Bo2g009770 Bo7g009850 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bo2g009770 1
Tree-based orthologmany-to-1Bo2g009770 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A00192 Brara.B00349 Brara.B02308 ...4
Tree-based orthologmany-to-manyBrara.B00349 Brara.B02308 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Brara.B02308 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_05026.g C.cajan_12635.g C.cajan_39618.g ...6
Tree-based orthologmany-to-manyC.cajan_05026.g C.cajan_39618.g C.cajan_39619.g ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1C.cajan_39618.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10000817m.g Carubv10006840m.g Carubv10016457m.g ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Carubv10000817m.g 1
Tree-based orthologmany-to-manyCarubv10000817m.g Carubv10021954m.g 2
Capsicum annuumOrthologous gene familymany-to-manyCAN.G100.74 CAN.G151.34 CAN.G151.37 ...10
Tree-based orthologmany-to-manyCAN.G151.34 CAN.G151.37 CAN.G1836.7 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1CAN.G1836.7 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc158.14 Cpa.g.sc36.122 Cpa.g.sc621.3 3
Tree-based orthologmany-to-manyCpa.g.sc36.122 Cpa.g.sc621.3 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cpa.g.sc621.3 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62002015 AUR62002016 AUR62003201 ...8
Tree-based orthologmany-to-manyAUR62002015 AUR62002016 AUR62003786 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyAUR62002016 AUR62003786 2
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre06.g311150 Cre06.g311200 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyCre06.g311150 Cre06.g311200 2
Tree-based orthologmany-to-manyCre06.g311150 Cre06.g311200 2
Cicer arietinumOrthologous gene familymany-to-manyCa_02076.g Ca_06138.g Ca_09573.g 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ca_09573.g 1
Tree-based orthologmany-to-1Ca_09573.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla014151.g Cla020122.g Cla023127.g 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cla014151.g 1
Tree-based orthologmany-to-manyCla014151.g Cla023127.g 2
Citrus clementinaOrthologous gene familymany-to-manyCiclev10000861m.g Ciclev10025430m.g Ciclev10025435m.g ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ciclev10000861m.g 1
Tree-based orthologmany-to-manyCiclev10000861m.g Ciclev10025435m.g Ciclev10027223m.g ...4
Coffea canephoraOrthologous gene familymany-to-manyCc00_g16200 Cc00_g16210 Cc00_g34670 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyCc00_g16200 Cc00_g16210 Cc00_g34670 3
Tree-based orthologmany-to-manyCc00_g16200 Cc00_g16210 Cc00_g34670 ...4
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_09949 COL.COLO4_09950 COL.COLO4_16421 ...4
Tree-based orthologmany-to-manyCOL.COLO4_09949 COL.COLO4_09950 COL.COLO4_16421 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1COL.COLO4_09950 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C003447 MELO3C007763 MELO3C013415 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1MELO3C003447 1
Tree-based orthologmany-to-manyMELO3C003447 MELO3C007763 2
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.104440 Cucsa.250470 Cucsa.312710 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cucsa.104440 1
Tree-based orthologmany-to-manyCucsa.104440 Cucsa.312710 2
Daucus carotaOrthologous gene familymany-to-manyDCAR_012734 DCAR_017222 DCAR_017223 ...6
Tree-based orthologmany-to-manyDCAR_012734 DCAR_029389 DCAR_029390 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyDCAR_029389 DCAR_029390 2
Erythranthe guttataOrthologous gene familymany-to-manyMigut.C00262 Migut.H00193 Migut.L00114 3
Tree-based orthologmany-to-manyMigut.C00262 Migut.L00114 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Migut.L00114 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.F00303 Eucgr.F00925 Eucgr.H01238 ...7
Tree-based orthologmany-to-manyEucgr.F00303 Eucgr.F00925 Eucgr.H04798 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyEucgr.H04798 Eucgr.H04799 2
Fragaria vescaOrthologous gene familymany-to-manyFVE16336 FVE16337 FVE22132 ...4
Tree-based orthologmany-to-manyFVE16336 FVE16337 FVE22132 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1FVE16337 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G178100 Glyma.08G136700 Glyma.08G136800 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Glyma.08G136700 1
Tree-based orthologmany-to-manyGlyma.08G136700 Glyma.08G136800 Glyma.14G172300 3
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.007G061200 Gorai.007G061300 Gorai.007G206200 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Gorai.007G061200 1
Tree-based orthologmany-to-manyGorai.007G061200 Gorai.007G061300 Gorai.009G238200 3
Hevea brasiliensisOrthologous gene familymany-to-manyHBR1368G003 HBR1368G023 HBR1847G017 ...4
Tree-based orthologmany-to-manyHBR1368G003 HBR1368G023 HBR1847G017 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1HBR1847G017 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1372.2 MDO.mRNA.g.1676.13 MDO.mRNA.g.2026.1 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1MDO.mRNA.g.1372.2 1
Tree-based orthologmany-to-manyMDO.mRNA.g.1372.2 MDO.mRNA.g.2026.2 MDO.mRNA.g.4265.6 3
Manihot esculentaOrthologous gene familymany-to-manyManes.12G098000 Manes.12G098100 Manes.12G136000 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Manes.12G136000 1
Tree-based orthologmany-to-manyManes.12G136000 Manes.18G068400 2
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0039s0035 Mapoly0049s0066 Mapoly0049s0070 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0039s0035 1
Tree-based orthologmany-to-1Mapoly0039s0035 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr5g019490 Medtr5g063390 Medtr8g090270 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Medtr5g063390 1
Tree-based orthologmany-to-manyMedtr5g063390 Medtr8g090270 Medtr8g090275 ...4
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_05444 NNU_20255 NNU_22476 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyNNU_20255 NNU_22476 2
Tree-based orthologmany-to-manyNNU_20255 NNU_22476 2
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00008g04614 Peaxi162Scf00016g01533 Peaxi162Scf00041g00128 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-1Peaxi162Scf00016g01533 1
Tree-based orthologmany-to-manyPeaxi162Scf00016g01533 Peaxi162Scf00041g00128 Peaxi162Scf00114g01019 ...8
Physcomitrium patensOrthologous gene familymany-to-manyPp3c16_21452 Pp3c3_26220 Pp3c3_31260 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPp3c3_26220 Pp3c5_26300 Pp3c6_5090 3
Tree-based orthologmany-to-manyPp3c3_26220 Pp3c5_26300 Pp3c6_5090 3
Picea abiesOrthologous gene familymany-to-manyPAB00016182 PAB00017967 PAB00023543 ...8
Tree-based orthologmany-to-manyPAB00023543 PAB00035888 PAB00051735 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPAB00051735 PAB00056780 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.005G165800 Potri.007G030800 Potri.007G091700 ...4
Tree-based orthologmany-to-manyPotri.005G165800 Potri.007G091700 Potri.007G091800 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Potri.007G091700 1
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G514700 Prupe.6G183300 Prupe.7G148900 3
Tree-based orthologmany-to-manyPrupe.1G514700 Prupe.6G183300 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Prupe.6G183300 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr005005.1.g Pbr005141.1.g Pbr016042.1.g ...10
Tree-based orthologmany-to-manyPbr005141.1.g Pbr016042.1.g Pbr028117.1.g ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPbr030818.1.g Pbr031137.1.g Pbr031140.1.g 3
Ricinus communisOrthologous gene familymany-to-manyRCO.g.27889.000002 RCO.g.29646.000009 RCO.g.29908.000068 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1RCO.g.29908.000068 1
Tree-based orthologmany-to-1RCO.g.29908.000068 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp3g32080 Tp3g32090 Tp6g33210 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Tp6g33210 1
Tree-based orthologmany-to-1Tp6g33210 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO201G0098 SMO228G0001 SMO367G1039 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1SMO201G0098 1
Tree-based orthologmany-to-1SMO201G0098 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc02g063020.1 Solyc02g085670.2 Solyc04g055080.2 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc04g055080.2 1
Tree-based orthologmany-to-manySolyc04g055080.2 Solyc04g073960.2 Solyc05g051900.2 ...9
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400001896 PGSC0003DMG400008543 PGSC0003DMG400012680 ...11
Best-Hits-and-Inparalogs(BHI)familymany-to-1PGSC0003DMG400001896 1
Tree-based orthologmany-to-manyPGSC0003DMG400001896 PGSC0003DMG400008543 PGSC0003DMG400017723 ...8
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104799050 THA.LOC104809713 THA.LOC104819807 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1THA.LOC104799050 1
Tree-based orthologmany-to-manyTHA.LOC104799050 THA.LOC104809713 THA.LOC104824996 3
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_000452 TCA.TCM_001130 TCA.TCM_001131 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1TCA.TCM_001132 1
Tree-based orthologmany-to-manyTCA.TCM_001132 TCA.TCM_034926 2
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G14362 TPR.G18537 TPR.G23212 ...6
Tree-based orthologmany-to-manyTPR.G14362 TPR.G6198 TPR.G6224 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1TPR.G6254 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00014.1959 UGI.Scf00559.17313 UGI.Scf00815.19144 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1UGI.Scf00559.17313 1
Tree-based orthologmany-to-manyUGI.Scf00559.17313 UGI.Scf00923.19639 2
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi06g07910 Vradi07g18940 Vradi11g05390 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Vradi06g07910 1
Tree-based orthologmany-to-manyVradi06g07910 Vradi07g18940 2
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01005870001 GSVIVG01009016001 GSVIVG01019019001 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01005870001 1
Tree-based orthologmany-to-manyGSVIVG01005870001 GSVIVG01009016001 2
Zea maysOrthologous gene familymany-to-manyZm00001d019165 Zm00001d020277 Zm00001d020279 ...10
Tree-based orthologmany-to-manyZm00001d020281 Zm00001d020282 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d020282 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107420827 ZJU.LOC107424810 ZJU.LOC107425174 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1ZJU.LOC107420827 1
Tree-based orthologmany-to-manyZJU.LOC107420827 ZJU.LOC107425174 2
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