Integrative Orthology Viewer: Cpa.g.sc3.306 (Carica papaya) top


Inparalogs

Organism Source Genes #genes Details
Carica papayaOrthologous gene familyCpa.g.c25723.3 Cpa.g.sc145.16 Cpa.g.sc29.107 ...8
Best-Hits-and-Inparalogs(BHI)familyCpa.g.sc3.306 1
Tree-based orthologCpa.g.sc3.306 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn010601 Achn010991 Achn089491 ...18
Tree-based ortholog1-to-manyAchn250801 Achn354581 Achn354591 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyAchn354581 Achn354591 2
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH003223 AH009129 AH012208 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1AH012225 1
Tree-based ortholog1-to-1AH012225 1
Amborella trichopodaOrthologous gene familymany-to-manyATR0564G060 ATR0564G230 ATR0564G469 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0665G568 1
Tree-based ortholog1-to-manyATR0759G076 ATR1159G028 2
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G26920 AL1G36920 AL2G13020 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1AL8G39190 1
Tree-based ortholog1-to-1AL8G39190 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G14890 AT1G23205 AT1G62760 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G62360 1
Tree-based ortholog1-to-1AT5G62360 1
Arachis ipaensisOrthologous gene familymany-to-1Araip.MP34A 1
Tree-based ortholog1-to-1Araip.MP34A 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.1E680 1
Beta vulgarisOrthologous gene familymany-to-manyBv1_018880_okrm Bv3_055920_xsqm Bv3_056000_nmrx ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv3_056000_nmrx 1
Tree-based ortholog1-to-1Bv3_056000_nmrx 1
Brassica oleraceaOrthologous gene familymany-to-manyBo1g039940 Bo1g039950 Bo1g039970 ...32
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo9g014930 1
Tree-based ortholog1-to-1Bo9g014930 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A01528 Brara.A01529 Brara.A01530 ...28
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.F02121 1
Tree-based ortholog1-to-manyBrara.F02121 Brara.I00687 2
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_01562.g C.cajan_02585.g C.cajan_03981.g ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_21758.g 1
Tree-based ortholog1-to-1C.cajan_21758.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10001965m.g Carubv10001980m.g Carubv10005764m.g ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10027064m.g 1
Tree-based ortholog1-to-1Carubv10027064m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1118.1 CAN.G1337.18 CAN.G1394.31 ...15
Tree-based ortholog1-to-manyCAN.G152.1 CAN.G152.2 CAN.G152.3 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyCAN.G152.2 CAN.G152.3 2
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62002189 AUR62004187 AUR62007460 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62002189 AUR62015522 2
Tree-based ortholog1-to-manyAUR62007461 AUR62039920 2
Cicer arietinumOrthologous gene familymany-to-manyCa_02370.g Ca_03124.g Ca_10442.g ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_24862.g 1
Tree-based ortholog1-to-1Ca_24862.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla003940.g Cla005681.g Cla006264.g ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla006266.g 1
Tree-based ortholog1-to-1Cla006266.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10005888m.g Ciclev10005926m.g Ciclev10005928m.g ...15
Best-Hits-and-Inparalogs(BHI)family1-to-manyCiclev10005926m.g Ciclev10005946m.g 2
Tree-based ortholog1-to-manyCiclev10005926m.g Ciclev10005946m.g 2
Coffea canephoraOrthologous gene familymany-to-manyCc02_g04100 Cc02_g04120 Cc02_g04130 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-manyCc02_g04130 Cc02_g04140 2
Tree-based ortholog1-to-manyCc02_g04130 Cc02_g04140 2
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_12523 COL.COLO4_13090 COL.COLO4_13091 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_14141 1
Tree-based ortholog1-to-1COL.COLO4_14141 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C005291 MELO3C005566 MELO3C005567 ...8
Tree-based ortholog1-to-1MELO3C005566 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C006821 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.251550 Cucsa.251560 Cucsa.251580 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.251580 1
Tree-based ortholog1-to-1Cucsa.251580 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_004913 DCAR_007318 DCAR_008458 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-manyDCAR_018097 DCAR_018098 DCAR_018099 3
Tree-based ortholog1-to-manyDCAR_018097 DCAR_018098 DCAR_018099 3
Erythranthe guttataOrthologous gene familymany-to-manyMigut.A00864 Migut.A00865 Migut.B01613 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manyMigut.F00459 Migut.F00460 2
Tree-based ortholog1-to-manyMigut.F00459 Migut.F00460 2
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.A02882 Eucgr.A02883 Eucgr.B02943 ...15
Tree-based ortholog1-to-manyEucgr.A02883 Eucgr.K00155 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.K00155 1
Fragaria vescaOrthologous gene familymany-to-manyFVE03920 FVE12923 FVE21256 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyFVE21256 FVE21257 2
Tree-based ortholog1-to-1FVE21256 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G138600 Glyma.01G138700 Glyma.01G211300 ...21
Tree-based ortholog1-to-manyGlyma.09G231900 Glyma.12G004600 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Glyma.12G004600 1
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G017200 Gorai.002G175900 Gorai.003G106800 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.003G114500 1
Tree-based ortholog1-to-1Gorai.003G114500 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0140G048 HBR0140G063 HBR0140G089 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-manyHBR0140G063 HBR0987G004 HBR3566G012 3
Tree-based ortholog1-to-manyHBR0140G063 HBR0987G004 HBR3566G012 3
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1300.6 MDO.mRNA.g.1300.7 MDO.mRNA.g.1300.9 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.3190.34 1
Tree-based ortholog1-to-1MDO.mRNA.g.3190.34 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G074800 Manes.01G074900 Manes.02G034700 ...21
Tree-based ortholog1-to-manyManes.06G136000 Manes.14G034900 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.14G034900 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr2g043560 Medtr3g008760 Medtr3g008820 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-manyMedtr4g035870 Medtr4g035880 Medtr4g035905 3
Tree-based ortholog1-to-manyMedtr4g035870 Medtr4g035880 Medtr4g035905 3
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_05074 NNU_08281 NNU_11740 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_14561 NNU_18232 2
Tree-based ortholog1-to-manyNNU_14561 NNU_18232 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os04g01570 LOC_Os06g49760 LOC_Os08g24160 ...8
Tree-based ortholog1-to-manyLOC_Os04g01570 LOC_Os06g49760 LOC_Os08g24160 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os10g36500 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00002g00042 Peaxi162Scf00013g00303 Peaxi162Scf00023g00102 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00241g00056 1
Tree-based ortholog1-to-1Peaxi162Scf00241g00056 1
Picea abiesOrthologous gene familymany-to-manyPAB00000288 PAB00011694 PAB00016281 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00011694 PAB00016281 PAB00016283 ...13
Tree-based ortholog1-to-manyPAB00011694 PAB00016281 PAB00016283 ...14
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G119200 Potri.001G119300 Potri.002G145800 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.015G128100 Potri.015G128200 Potri.015G128300 3
Tree-based ortholog1-to-manyPotri.015G128100 Potri.015G128200 Potri.015G128300 3
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G330900 Prupe.2G141800 Prupe.2G279700 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.2G279700 1
Tree-based ortholog1-to-1Prupe.2G279700 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr012743.1.g Pbr012744.1.g Pbr012745.1.g ...17
Tree-based ortholog1-to-manyPbr012743.1.g Pbr012744.1.g Pbr012745.1.g ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyPbr012744.1.g Pbr012746.1.g Pbr015759.1.g ...4
Ricinus communisOrthologous gene familymany-to-manyRCO.g.29656.000002 RCO.g.29692.000009 RCO.g.29739.000145 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.30147.000475 1
Tree-based ortholog1-to-1RCO.g.30147.000475 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g13330 Tp1g20670 Tp2g01870 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp2g25530 1
Tree-based ortholog1-to-1Tp2g25530 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g091100.2 Solyc01g091110.2 Solyc03g083660.1 ...16
Tree-based ortholog1-to-manySolyc03g083730.1 Solyc03g083770.1 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc03g083770.1 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400001276 PGSC0003DMG400002898 PGSC0003DMG400004735 ...20
Tree-based ortholog1-to-manyPGSC0003DMG400012017 PGSC0003DMG400012019 PGSC0003DMG400012020 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPGSC0003DMG400012019 PGSC0003DMG400012020 2
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104799610 THA.LOC104808286 THA.LOC104809450 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1THA.LOC104821406 1
Tree-based ortholog1-to-1THA.LOC104821406 1
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_005539 TCA.TCM_010984 TCA.TCM_014946 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_014946 1
Tree-based ortholog1-to-1TCA.TCM_014946 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G12545 TPR.G15126 TPR.G15131 ...10
Tree-based ortholog1-to-manyTPR.G15126 TPR.G7492 2
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G7492 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00020.2626 UGI.Scf00025.3141 UGI.Scf00030.3602 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyUGI.Scf00020.2626 UGI.Scf00030.3602 2
Tree-based ortholog1-to-1UGI.Scf00635.17929 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi02g00500 Vradi05g01750 Vradi05g21880 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi02g00500 1
Tree-based ortholog1-to-1Vradi02g00500 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01018598001 GSVIVG01018604001 GSVIVG01018606001 ...5
Tree-based ortholog1-to-manyGSVIVG01018604001 GSVIVG01018606001 GSVIVG01018607001 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyGSVIVG01018606001 GSVIVG01018607001 GSVIVG01018608001 3
Zea maysOrthologous gene familymany-to-manyZm00001d014757 Zm00001d024913 Zm00001d030035 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyZm00001d014757 Zm00001d036431 2
Tree-based ortholog1-to-manyZm00001d014757 Zm00001d024913 Zm00001d030035 ...6
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107406428 ZJU.LOC107406429 ZJU.LOC107406891 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manyZJU.LOC107414289 ZJU.LOC107414336 ZJU.LOC107414343 3
Tree-based ortholog1-to-manyZJU.LOC107414289 ZJU.LOC107414336 ZJU.LOC107414343 3
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