Integrative Orthology Viewer: Cc11_g13460 (Coffea canephora) top


Inparalogs

Organism Source Genes #genes Details
Coffea canephoraOrthologous gene familyCc06_g13320 Cc07_g03010 Cc07_g07040 ...6
Anchor pointCc07_g03010 Cc04_g15520 2
Best-Hits-and-Inparalogs(BHI)familyCc11_g13460 Cc11_g13470 2
Tree-based orthologCc11_g13460 Cc11_g13470 2

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn012811 Achn088541 Achn183151 ...11
Anchor pointmany-to-manyAchn088541 Achn183151 Achn208771 ...5
Tree-based orthologmany-to-manyAchn088541 Achn208771 Achn144001 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Achn208771 1
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH000660 AH003870 AH004605 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-1AH004605 1
Tree-based orthologmany-to-manyAH004605 AH005108 2
Anchor pointmany-to-manyAH005108 AH015749 2
Amborella trichopodaOrthologous gene familymany-to-manyATR0580G110 ATR0697G113 ATR0697G282 ...5
Anchor pointmany-to-1ATR1120G159 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR1120G159 1
Tree-based orthologmany-to-1ATR1120G159 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL3G10960 AL5G29930 AL6G25910 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1AL3G10960 1
Tree-based orthologmany-to-manyAL3G10960 AL6G25910 2
Anchor pointmany-to-1AL6G25910 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT3G01280 AT3G49920 AT5G15090 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT3G01280 1
Tree-based orthologmany-to-manyAT3G01280 AT5G15090 2
Anchor pointmany-to-1AT5G15090 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.1YR52 Araip.37K80 Araip.D6LRR ...8
Anchor pointmany-to-manyAraip.1YR52 Araip.7Y21E 2
Tree-based orthologmany-to-manyAraip.1YR52 Araip.HZA1U 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Araip.D6LRR 1
Beta vulgarisOrthologous gene familymany-to-manyBv2_040400_wwnp Bv6_128150_iand Bv6_154570_sjpf ...5
Anchor pointmany-to-1Bv6_154570_sjpf 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bv6_154570_sjpf 1
Tree-based orthologmany-to-1Bv6_154570_sjpf 1
Brassica oleraceaOrthologous gene familymany-to-manyBo01417s020 Bo1g158790 Bo2g012360 ...16
Tree-based orthologmany-to-manyBo1g158790 Bo2g012360 Bo3g055210 ...6
Anchor pointmany-to-1Bo2g012360 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bo2g012360 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A03926 Brara.B00586 Brara.C01190 ...10
Tree-based orthologmany-to-manyBrara.A03926 Brara.B00586 Brara.C02952 ...5
Anchor pointmany-to-1Brara.B00586 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Brara.B00586 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_03638.g C.cajan_08221.g C.cajan_14403.g ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1C.cajan_08221.g 1
Tree-based orthologmany-to-1C.cajan_14403.g 1
Anchor pointmany-to-1C.cajan_01675.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10001678m.g Carubv10014234m.g Carubv10017863m.g ...5
Anchor pointmany-to-1Carubv10001678m.g 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Carubv10001678m.g 1
Tree-based orthologmany-to-manyCarubv10001678m.g Carubv10014234m.g 2
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1075.30 CAN.G1128.3 CAN.G176.7 ...12
Anchor pointmany-to-1CAN.G206.112 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1CAN.G38.28 1
Tree-based orthologmany-to-1CAN.G38.28 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.c32999 Cpa.g.sc5.272 Cpa.g.sc6.23 ...4
Anchor pointmany-to-1Cpa.g.sc5.272 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cpa.g.sc5.272 1
Tree-based orthologmany-to-1Cpa.g.sc5.272 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62004001 AUR62005728 AUR62027002 ...10
Anchor pointmany-to-manyAUR62005728 AUR62028832 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyAUR62005728 AUR62028832 2
Tree-based orthologmany-to-manyAUR62005728 AUR62028832 2
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre01.g013700 Cre05.g241950 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyCre01.g013700 Cre05.g241950 2
Tree-based orthologmany-to-manyCre01.g013700 Cre05.g241950 2
Cicer arietinumOrthologous gene familymany-to-manyCa_02221.g Ca_03253.g Ca_10539.g ...5
Anchor pointmany-to-manyCa_10539.g Ca_15337.g 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ca_10539.g 1
Tree-based orthologmany-to-manyCa_10539.g Ca_20683.g 2
Citrullus lanatusOrthologous gene familymany-to-manyCla017029.g Cla018824.g Cla020200.g ...4
Anchor pointmany-to-1Cla021891.g 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cla021891.g 1
Tree-based orthologmany-to-1Cla021891.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10009163m.g Ciclev10012445m.g Ciclev10026251m.g ...4
Anchor pointmany-to-manyCiclev10032366m.g Ciclev10021785m.g 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Ciclev10032366m.g 1
Tree-based orthologmany-to-1Ciclev10032366m.g 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_07927 COL.COLO4_11568 COL.COLO4_25174 ...5
Anchor pointmany-to-1COL.COLO4_07927 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1COL.COLO4_07927 1
Tree-based orthologmany-to-1COL.COLO4_07927 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C000215 MELO3C009893 MELO3C016818 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1MELO3C009893 1
Tree-based orthologmany-to-1MELO3C019776 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.005450 Cucsa.092460 Cucsa.339100 ...5
Anchor pointmany-to-1Cucsa.005450 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cucsa.005450 1
Tree-based orthologmany-to-1Cucsa.005450 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_000295 DCAR_007133 DCAR_011162 ...11
Anchor pointmany-to-manyDCAR_007133 DCAR_027387 DCAR_031049 3
Tree-based orthologmany-to-manyDCAR_007133 DCAR_027387 DCAR_031049 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1DCAR_011162 1
Erythranthe guttataOrthologous gene familymany-to-manyMigut.E00113 Migut.H00352 Migut.H00889 ...8
Anchor pointmany-to-manyMigut.E00113 Migut.L01341 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMigut.E00113 Migut.L01341 2
Tree-based orthologmany-to-manyMigut.E00113 Migut.L01341 2
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.C00165 Eucgr.F02253 Eucgr.G02544 ...6
Anchor pointmany-to-manyEucgr.G02544 Eucgr.B00430 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Eucgr.G02544 1
Tree-based orthologmany-to-1Eucgr.G02544 1
Fragaria vescaOrthologous gene familymany-to-manyFVE01268 FVE02569 FVE05750 ...7
Anchor pointmany-to-manyFVE01268 FVE25946 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1FVE01268 1
Tree-based orthologmany-to-manyFVE01268 FVE20402 FVE23089 ...4
Glycine maxOrthologous gene familymany-to-manyGlyma.01G193700 Glyma.08G296700 Glyma.09G240600 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-manyGlyma.08G296700 Glyma.18G125500 2
Tree-based orthologmany-to-manyGlyma.08G296700 Glyma.18G125500 2
Anchor pointmany-to-manyGlyma.13G064900 Glyma.18G125500 Glyma.18G255700 ...8
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G256800 Gorai.004G100400 Gorai.005G114000 ...15
Anchor pointmany-to-manyGorai.005G139100 Gorai.006G024700 Gorai.008G182700 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manyGorai.005G139100 Gorai.009G323300 2
Tree-based orthologmany-to-manyGorai.005G139100 Gorai.008G182700 Gorai.009G323300 3
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0436G011 HBR0436G025 HBR0471G006 ...8
Anchor pointmany-to-manyHBR0471G006 HBR0334G030 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyHBR0471G006 HBR0732G002 2
Tree-based orthologmany-to-manyHBR0471G006 HBR0732G002 2
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1221.43 MDO.mRNA.g.1506.41 MDO.mRNA.g.168.19 ...9
Anchor pointmany-to-manyMDO.mRNA.g.1506.41 MDO.mRNA.g.511.30 2
Tree-based orthologmany-to-manyMDO.mRNA.g.1506.41 MDO.mRNA.g.511.30 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1MDO.mRNA.g.511.30 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G189900 Manes.05G097000 Manes.05G181800 ...6
Anchor pointmany-to-manyManes.01G189900 Manes.05G097000 Manes.14G074800 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Manes.01G189900 1
Tree-based orthologmany-to-1Manes.01G189900 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0001s0240 Mapoly0045s0018 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0001s0240 1
Tree-based orthologmany-to-manyMapoly0001s0240 Mapoly0045s0018 2
Medicago truncatulaOrthologous gene familymany-to-manyMedtr1g018205 Medtr4g128300 Medtr5g015580 ...6
Anchor pointmany-to-1Medtr6g011390 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Medtr6g011390 1
Tree-based orthologmany-to-1Medtr8g469150 1
Micromonas commodaOrthologous gene familymany-to-manyMCO01G034 MCO02G071 2
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_07203 NNU_13747 NNU_15048 ...4
Anchor pointmany-to-1NNU_07203 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1NNU_07203 1
Tree-based orthologmany-to-1NNU_07203 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g40570 LOC_Os01g51770 LOC_Os03g04460 ...5
Tree-based orthologmany-to-manyLOC_Os01g40570 LOC_Os01g51770 LOC_Os05g45950 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1LOC_Os09g19734 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00009g00319 Peaxi162Scf00026g02311 Peaxi162Scf00059g00318 ...11
Best-Hits-and-Inparalogs(BHI)familymany-to-1Peaxi162Scf00026g02311 1
Tree-based orthologmany-to-manyPeaxi162Scf00026g02311 Peaxi162Scf00209g00324 2
Anchor pointmany-to-manyPeaxi162Scf00129g00515 Peaxi162Scf00451g00928 2
Physcomitrium patensOrthologous gene familymany-to-manyPp3c10_18660 Pp3c15_9100 Pp3c9_21110 3
Tree-based orthologmany-to-manyPp3c10_18660 Pp3c15_9100 Pp3c9_21110 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPp3c15_9100 Pp3c9_21110 2
Picea abiesOrthologous gene familymany-to-manyPAB00000160 PAB00007516 PAB00024139 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-1PAB00035709 1
Tree-based orthologmany-to-1PAB00049389 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G293800 Potri.001G294000 Potri.001G294100 ...14
Anchor pointmany-to-manyPotri.008G194900 Potri.012G070300 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPotri.008G194900 Potri.010G033500 2
Tree-based orthologmany-to-manyPotri.008G194900 Potri.010G033500 2
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G086700 Prupe.1G268200 Prupe.1G423200 ...6
Anchor pointmany-to-manyPrupe.1G268200 Prupe.3G271800 Prupe.5G186500 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Prupe.1G268200 1
Tree-based orthologmany-to-1Prupe.1G268200 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr001039.1.g Pbr019747.1.g Pbr023541.1.g ...7
Anchor pointmany-to-manyPbr039135.1.g Pbr011482.1.g 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Pbr039135.1.g 1
Tree-based orthologmany-to-1Pbr039135.1.g 1
Ricinus communisOrthologous gene familymany-to-manyRCO.g.29661.000019 RCO.g.29736.000030 RCO.g.29822.000148 ...4
Anchor pointmany-to-manyRCO.g.29736.000030 RCO.g.29822.000148 RCO.g.30147.000343 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1RCO.g.29736.000030 1
Tree-based orthologmany-to-1RCO.g.29736.000030 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp2g29150 Tp3g00820 Tp5g12190 ...5
Tree-based orthologmany-to-manyTp3g00820 Tp6g28980 2
Anchor pointmany-to-1Tp6g28980 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Tp6g28980 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO146G0170 SMO238G0030 SMO271G0145 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1SMO146G0170 1
Tree-based orthologmany-to-manySMO146G0170 SMO238G0030 SMO271G0145 ...4
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g010760.2 Solyc02g067460.2 Solyc02g092440.2 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc01g010760.2 1
Tree-based orthologmany-to-1Solyc01g010760.2 1
Anchor pointmany-to-1Solyc03g113210.2 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400000864 PGSC0003DMG400002066 PGSC0003DMG400006896 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1PGSC0003DMG400000864 1
Tree-based orthologmany-to-1PGSC0003DMG400000864 1
Anchor pointmany-to-1PGSC0003DMG400025346 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104802417 THA.LOC104811792 THA.LOC104813525 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTHA.LOC104802417 THA.LOC104821046 2
Tree-based orthologmany-to-manyTHA.LOC104802417 THA.LOC104821046 THA.LOC104822371 3
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_000790 TCA.TCM_007229 TCA.TCM_011800 ...6
Anchor pointmany-to-manyTCA.TCM_011800 TCA.TCM_018364 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1TCA.TCM_011800 1
Tree-based orthologmany-to-1TCA.TCM_011800 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G16086 TPR.G33253 TPR.G34848 ...7
Anchor pointmany-to-1TPR.G33253 1
Tree-based orthologmany-to-1TPR.G33253 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1TPR.G4350 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00005.876 UGI.Scf00084.7138 UGI.Scf00096.7724 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyUGI.Scf00005.876 UGI.Scf00096.7724 2
Tree-based orthologmany-to-manyUGI.Scf00005.876 UGI.Scf00096.7724 2
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi04g08510 Vradi06g14680 Vradi07g05600 ...5
Anchor pointmany-to-manyVradi04g08510 Vradi07g05600 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Vradi07g05600 1
Tree-based orthologmany-to-1Vradi07g05600 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000115001 GSVIVG01000122001 GSVIVG01009346001 ...6
Anchor pointmany-to-manyGSVIVG01011346001 GSVIVG01020070001 GSVIVG01008059001 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01011346001 1
Tree-based orthologmany-to-1GSVIVG01020070001 1
Zea maysOrthologous gene familymany-to-manyZm00001d005649 Zm00001d011135 Zm00001d011242 ...13
Tree-based orthologmany-to-manyZm00001d011135 Zm00001d011242 Zm00001d020219 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d038840 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107410370 ZJU.LOC107415614 ZJU.LOC107424967 3
Anchor pointmany-to-1ZJU.LOC107415614 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1ZJU.LOC107415614 1
Tree-based orthologmany-to-1ZJU.LOC107415614 1
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