Integrative Orthology Viewer: Cc04_g11700 (Coffea canephora) top


Inparalogs

Organism Source Genes #genes Details
Coffea canephoraOrthologous gene familyCc02_g36770 Cc02_g38380 Cc02_g38390 ...5
Best-Hits-and-Inparalogs(BHI)familyCc04_g11700 1
Tree-based orthologCc04_g11700 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn011561 Achn021371 Achn188071 ...8
Anchor pointN/AAchn021371 Achn298111 2
Tree-based ortholog1-to-manyAchn021371 Achn298111 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Achn298111 1
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH002514 AH004244 AH009654 ...8
Anchor pointN/AAH002514 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AH002514 1
Tree-based ortholog1-to-1AH002514 1
Amborella trichopodaOrthologous gene familymany-to-manyATR0661G159 ATR0824G062 ATR1089G123 3
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0824G062 1
Tree-based ortholog1-to-1ATR0824G062 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G10800 AL1G10810 AL1G36590 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1AL8G24170 1
Tree-based ortholog1-to-1AL8G24170 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G01580 AT1G01590 AT1G23020 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G50160 1
Tree-based ortholog1-to-1AT5G50160 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.AS8IW Araip.B8TBZ Araip.E239M ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.B8TBZ 1
Tree-based ortholog1-to-1Araip.B8TBZ 1
Beta vulgarisOrthologous gene familymany-to-manyBv1_004230_gajk Bv3_053570_sgio Bv5_118060_ttqx ...4
Anchor pointN/ABv5_118060_ttqx 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv5_118060_ttqx 1
Tree-based ortholog1-to-1Bv5_118060_ttqx 1
Brassica oleraceaOrthologous gene familymany-to-manyBo1g078630 Bo1g078640 Bo2g160760 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo5g048600 1
Tree-based ortholog1-to-1Bo5g048600 1
Brassica rapaOrthologous gene familymany-to-manyBrara.B03702 Brara.F02620 Brara.I00009 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.I02647 1
Tree-based ortholog1-to-1Brara.I02647 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_07254.g C.cajan_09179.g C.cajan_16634.g ...7
Anchor pointN/AC.cajan_09179.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_09179.g 1
Tree-based ortholog1-to-1C.cajan_09179.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10000325m.g Carubv10003155m.g Carubv10008345m.g ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10025968m.g 1
Tree-based ortholog1-to-1Carubv10025968m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G126.21 CAN.G126.40 CAN.G126.41 ...10
Anchor pointN/ACAN.G126.21 CAN.G338.24 2
Best-Hits-and-Inparalogs(BHI)family1-to-1CAN.G338.24 1
Tree-based ortholog1-to-1CAN.G338.24 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc107.98 Cpa.g.sc107.99 Cpa.g.sc11.38 ...7
Anchor pointN/ACpa.g.sc110.3 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc110.3 1
Tree-based ortholog1-to-1Cpa.g.sc110.3 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62004392 AUR62008153 AUR62021134 ...7
Anchor pointN/AAUR62008153 AUR62028734 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62008153 AUR62028734 2
Tree-based ortholog1-to-manyAUR62008153 AUR62028734 2
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre04.g227400 Cre05.g241400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre04.g227400 1
Tree-based ortholog1-to-1Cre04.g227400 1
Cicer arietinumOrthologous gene familymany-to-manyCa_04440.g Ca_07955.g Ca_08818.g ...5
Tree-based ortholog1-to-manyCa_04440.g Ca_13723.g Ca_13725.g 3
Anchor pointN/ACa_08818.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyCa_13723.g Ca_13725.g 2
Citrullus lanatusOrthologous gene familymany-to-manyCla001505.g Cla004551.g Cla006154.g ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla001505.g 1
Tree-based ortholog1-to-1Cla001505.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10000235m.g Ciclev10006989m.g Ciclev10007201m.g ...5
Anchor pointN/ACiclev10019061m.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10019061m.g 1
Tree-based ortholog1-to-1Ciclev10019061m.g 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_05566 COL.COLO4_06788 COL.COLO4_06789 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_05566 1
Tree-based ortholog1-to-1COL.COLO4_05566 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C000393 MELO3C006944 MELO3C011744 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C022332 1
Tree-based ortholog1-to-1MELO3C022332 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.108040 Cucsa.166120 Cucsa.260380 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.349490 1
Tree-based ortholog1-to-1Cucsa.349490 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_001876 DCAR_005357 DCAR_005358 ...9
Anchor pointN/ADCAR_026171 1
Best-Hits-and-Inparalogs(BHI)family1-to-1DCAR_026171 1
Tree-based ortholog1-to-1DCAR_026171 1
Erythranthe guttataOrthologous gene familymany-to-manyMigut.B00686 Migut.B01780 Migut.B01781 ...15
Anchor pointN/AMigut.O00149 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.O00149 1
Tree-based ortholog1-to-1Migut.O00149 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.A02749 Eucgr.A02751 Eucgr.B03992 ...11
Anchor pointN/AEucgr.K02803 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.K02803 1
Tree-based ortholog1-to-1Eucgr.K02803 1
Fragaria vescaOrthologous gene familymany-to-manyFVE09927 FVE13204 FVE13208 ...6
Anchor pointN/AFVE09927 1
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE09927 1
Tree-based ortholog1-to-1FVE09927 1
Glycine maxOrthologous gene familymany-to-manyGlyma.05G041200 Glyma.07G067700 Glyma.09G018600 ...9
Anchor pointN/AGlyma.05G041200 Glyma.17G085100 2
Tree-based ortholog1-to-manyGlyma.05G041200 Glyma.17G085100 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Glyma.17G085100 1
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.006G050400 Gorai.006G050700 Gorai.007G101800 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.009G267500 1
Tree-based ortholog1-to-1Gorai.009G267500 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0019G016 HBR0307G006 HBR1712G001 ...9
Anchor pointN/AHBR2206G062 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HBR2206G062 1
Tree-based ortholog1-to-1HBR2206G062 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1135.2 MDO.mRNA.g.17.28 MDO.mRNA.g.1876.46 ...14
Anchor pointN/AMDO.mRNA.g.1135.2 MDO.mRNA.g.1889.16 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.1889.16 1
Tree-based ortholog1-to-1MDO.mRNA.g.1889.16 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G254300 Manes.05G031600 Manes.06G016800 ...6
Anchor pointN/AManes.06G109600 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.06G109600 1
Tree-based ortholog1-to-1Manes.06G109600 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0002s0287 Mapoly0033s0165 Mapoly0043s0144 ...22
Tree-based ortholog1-to-manyMapoly0002s0287 Mapoly0033s0165 Mapoly0043s0144 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0033s0165 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr1g100130 Medtr1g100150 Medtr2g028530 ...8
Anchor pointN/AMedtr4g105080 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr4g105080 1
Tree-based ortholog1-to-1Medtr4g105080 1
Micromonas commodaOrthologous gene familymany-to-manyMCO04G008 MCO09G074 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO09G074 1
Tree-based ortholog1-to-1MCO09G074 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_07923 NNU_08611 NNU_08612 ...6
Anchor pointN/ANNU_21944 1
Best-Hits-and-Inparalogs(BHI)family1-to-1NNU_21944 1
Tree-based ortholog1-to-1NNU_21944 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os04g36720 LOC_Os04g48930 2
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os04g48930 1
Tree-based ortholog1-to-1LOC_Os04g48930 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00020g01031 Peaxi162Scf00071g00030 Peaxi162Scf00089g01433 ...12
Anchor pointN/APeaxi162Scf00089g01433 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00089g01433 1
Tree-based ortholog1-to-1Peaxi162Scf00089g01433 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c11_1030 Pp3c16_11510 Pp3c17_11310 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c11_1030 Pp3c16_11510 2
Tree-based ortholog1-to-manyPp3c11_1030 Pp3c16_11510 Pp3c17_11310 ...6
Picea abiesOrthologous gene familymany-to-manyPAB00007306 PAB00018528 PAB00027455 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00047704 PAB00054214 2
Tree-based ortholog1-to-manyPAB00047704 PAB00054214 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G079000 Potri.004G079100 Potri.004G079200 ...9
Anchor pointN/APotri.012G084800 Potri.015G083200 2
Tree-based ortholog1-to-manyPotri.012G084800 Potri.015G083200 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.015G083200 1
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G587800 Prupe.2G174300 Prupe.2G299800 ...5
Anchor pointN/APrupe.5G166400 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.5G166400 1
Tree-based ortholog1-to-1Prupe.5G166400 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr009114.1.g Pbr009115.1.g Pbr010859.2.g ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPbr009114.1.g Pbr009115.1.g 2
Tree-based ortholog1-to-manyPbr009114.1.g Pbr009115.1.g Pbr010859.2.g ...7
Ricinus communisOrthologous gene familymany-to-manyRCO.g.30063.000036 RCO.g.30063.000039 RCO.g.30147.000150 ...7
Anchor pointN/ARCO.g.30147.000150 1
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.30147.000150 1
Tree-based ortholog1-to-1RCO.g.30147.000150 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g00730 Tp1g00740 Tp2g23320 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp6g12210 1
Tree-based ortholog1-to-1Tp6g12210 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO119G0126 SMO119G0169 SMO164G0187 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manySMO119G0126 SMO119G0169 SMO198G0045 ...4
Tree-based ortholog1-to-manySMO119G0126 SMO119G0169 SMO164G0187 ...6
Solanum lycopersicumOrthologous gene familymany-to-manySolyc00g020840.2 Solyc00g026160.2 Solyc01g094890.2 ...8
Anchor pointN/ASolyc03g112320.2 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc03g112320.2 1
Tree-based ortholog1-to-1Solyc03g112320.2 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400000184 PGSC0003DMG400010125 PGSC0003DMG400018114 ...6
Anchor pointN/APGSC0003DMG400018114 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG400018114 1
Tree-based ortholog1-to-1PGSC0003DMG400018114 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104800318 THA.LOC104809245 THA.LOC104818163 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1THA.LOC104809245 1
Tree-based ortholog1-to-1THA.LOC104809245 1
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_005288 TCA.TCM_012164 TCA.TCM_012218 ...6
Anchor pointN/ATCA.TCM_012164 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_012164 1
Tree-based ortholog1-to-1TCA.TCM_012164 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G17487 TPR.G17525 TPR.G18324 ...10
Anchor pointN/ATPR.G37563 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G37563 1
Tree-based ortholog1-to-1TPR.G37563 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00103.8066 UGI.Scf00297.13601 2
Best-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf00103.8066 1
Tree-based ortholog1-to-manyUGI.Scf00103.8066 UGI.Scf00297.13601 2
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi0223s00060 Vradi04g06940 Vradi08g18550 ...5
Anchor pointN/AVradi0223s00060 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi0223s00060 1
Tree-based ortholog1-to-1Vradi0223s00060 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01007662001 GSVIVG01023105001 GSVIVG01026991001 ...6
Anchor pointN/AGSVIVG01007662001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01007662001 1
Tree-based ortholog1-to-1GSVIVG01007662001 1
Zea maysOrthologous gene familymany-to-1Zm00001d003559 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d003559 1
Tree-based ortholog1-to-1Zm00001d003559 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107406527 ZJU.LOC107414733 ZJU.LOC107414747 ...7
Anchor pointN/AZJU.LOC107418289 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ZJU.LOC107418289 1
Tree-based ortholog1-to-1ZJU.LOC107418289 1
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