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Integrative Orthology Viewer:
Cc01_g00190
(Coffea canephora)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Coffea canephora | Orthologous gene family | Cc01_g00190 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | Cc01_g00190 | 1 | ||
| Tree-based ortholog | Cc01_g00190 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Actinidia chinensis | Orthologous gene family | 1-to-1 | Achn278011 | 1 | |
| Anchor point | N/A | Achn278011 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Achn278011 | 1 | ||
| Tree-based ortholog | 1-to-1 | Achn278011 | 1 | ||
| Amaranthus hypochondriacus | Orthologous gene family | 1-to-many | AH010599 AH010600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AH010599 | 1 | ||
| Tree-based ortholog | 1-to-1 | AH010599 | 1 | ||
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR0697G079 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0697G079 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR0697G079 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G63500 | 1 | |
| Anchor point | N/A | AL1G63500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G63500 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL1G63500 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G55480 | 1 | |
| Anchor point | N/A | AT1G55480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G55480 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G55480 | 1 | ||
| Arachis ipaensis | Orthologous gene family | 1-to-1 | Araip.JN8X7 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Araip.JN8X7 | 1 | ||
| Tree-based ortholog | 1-to-1 | Araip.JN8X7 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-many | Bv4_070870_fzrx Bv8_186130_dkew | 2 | |
| Anchor point | N/A | Bv4_070870_fzrx | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bv4_070870_fzrx | 1 | ||
| Tree-based ortholog | 1-to-many | Bv4_070870_fzrx Bv8_186130_dkew | 2 | ||
| Brassica oleracea | Orthologous gene family | 1-to-1 | Bo6g051340 | 1 | |
| Anchor point | N/A | Bo6g051340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bo6g051340 | 1 | ||
| Tree-based ortholog | 1-to-1 | Bo6g051340 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | Brara.E01462 | 1 | |
| Anchor point | N/A | Brara.E01462 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Brara.E01462 | 1 | ||
| Tree-based ortholog | 1-to-1 | Brara.E01462 | 1 | ||
| Cajanus cajan | Orthologous gene family | 1-to-1 | C.cajan_20482.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | C.cajan_20482.g | 1 | ||
| Tree-based ortholog | 1-to-1 | C.cajan_20482.g | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | Carubv10011413m.g | 1 | |
| Anchor point | N/A | Carubv10011413m.g | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Carubv10011413m.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Carubv10011413m.g | 1 | ||
| Capsicum annuum | Orthologous gene family | 1-to-1 | CAN.G1834.14 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CAN.G1834.14 | 1 | ||
| Tree-based ortholog | 1-to-1 | CAN.G1834.14 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | Cpa.g.sc119.36 | 1 | |
| Anchor point | N/A | Cpa.g.sc119.36 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cpa.g.sc119.36 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cpa.g.sc119.36 | 1 | ||
| Chenopodium quinoa | Orthologous gene family | 1-to-many | AUR62005847 AUR62032839 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AUR62005847 AUR62032839 | 2 | ||
| Tree-based ortholog | 1-to-many | AUR62005847 AUR62032839 | 2 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | Cre01.g031100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre01.g031100 | 1 | ||
| Tree-based ortholog | 1-to-many | Cre10.g439350 Cre06.g261026 | 2 | ||
| Cicer arietinum | Orthologous gene family | 1-to-many | Ca_08671.g Ca_08672.g | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Ca_08671.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Ca_08671.g | 1 | ||
| Anchor point | N/A | Ca_08672.g | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | Cla003123.g | 1 | |
| Anchor point | N/A | Cla003123.g | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cla003123.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Cla003123.g | 1 | ||
| Citrus clementina | Orthologous gene family | 1-to-many | Ciclev10015873m.g Ciclev10018072m.g | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Ciclev10015873m.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Ciclev10015873m.g | 1 | ||
| Anchor point | N/A | Ciclev10018072m.g | 1 | ||
| Corchorus olitorius | Orthologous gene family | 1-to-1 | COL.COLO4_07519 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | COL.COLO4_07519 | 1 | ||
| Tree-based ortholog | 1-to-1 | COL.COLO4_07519 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | MELO3C014728 | 1 | |
| Anchor point | N/A | MELO3C014728 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MELO3C014728 | 1 | ||
| Tree-based ortholog | 1-to-1 | MELO3C014728 | 1 | ||
| Cucumis sativus L. | Orthologous gene family | 1-to-1 | Cucsa.152700 | 1 | |
| Anchor point | N/A | Cucsa.152700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cucsa.152700 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cucsa.152700 | 1 | ||
| Daucus carota | Orthologous gene family | 1-to-1 | DCAR_023818 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | DCAR_023818 | 1 | ||
| Tree-based ortholog | 1-to-1 | DCAR_023818 | 1 | ||
| Erythranthe guttata | Orthologous gene family | 1-to-1 | Migut.N00542 | 1 | |
| Anchor point | N/A | Migut.N00542 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Migut.N00542 | 1 | ||
| Tree-based ortholog | 1-to-1 | Migut.N00542 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | Eucgr.J01758 | 1 | |
| Anchor point | N/A | Eucgr.J01758 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Eucgr.J01758 | 1 | ||
| Tree-based ortholog | 1-to-1 | Eucgr.J01758 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FVE01598 | 1 | |
| Anchor point | N/A | FVE01598 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FVE01598 | 1 | ||
| Tree-based ortholog | 1-to-1 | FVE01598 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | Glyma.05G166800 Glyma.08G124900 | 2 | |
| Anchor point | N/A | Glyma.05G166800 Glyma.08G124900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Glyma.05G166800 | 1 | ||
| Tree-based ortholog | 1-to-many | Glyma.05G166800 Glyma.08G124900 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | Gorai.012G114400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Gorai.012G114400 | 1 | ||
| Tree-based ortholog | 1-to-1 | Gorai.012G114400 | 1 | ||
| Hevea brasiliensis | Orthologous gene family | 1-to-many | HBR2759G072 HBR3107G003 HBR3107G005 | 3 | |
| Anchor point | N/A | HBR2759G072 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HBR2759G072 HBR3107G003 HBR3107G005 | 3 | ||
| Tree-based ortholog | 1-to-many | HBR2759G072 HBR3107G003 HBR3107G005 | 3 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MDO.mRNA.g.1539.11 MDO.mRNA.g.872.25 | 2 | |
| Anchor point | N/A | MDO.mRNA.g.1539.11 MDO.mRNA.g.872.25 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MDO.mRNA.g.1539.11 | 1 | ||
| Tree-based ortholog | 1-to-many | MDO.mRNA.g.1539.11 MDO.mRNA.g.872.25 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | Manes.15G110100 | 1 | |
| Anchor point | N/A | Manes.15G110100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Manes.15G110100 | 1 | ||
| Tree-based ortholog | 1-to-1 | Manes.15G110100 | 1 | ||
| Marchantia polymorpha | Orthologous gene family | 1-to-1 | Mapoly0020s0152 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0020s0152 | 1 | ||
| Tree-based ortholog | 1-to-1 | Mapoly0020s0152 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | Medtr8g088420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Medtr8g088420 | 1 | ||
| Tree-based ortholog | 1-to-1 | Medtr8g088420 | 1 | ||
| Micromonas commoda | Orthologous gene family | 1-to-1 | MCO13G101 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO13G101 | 1 | ||
| Tree-based ortholog | 1-to-1 | MCO05G137 | 1 | ||
| Nelumbo nucifera | Orthologous gene family | 1-to-1 | NNU_23619 | 1 | |
| Anchor point | N/A | NNU_23619 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | NNU_23619 | 1 | ||
| Tree-based ortholog | 1-to-1 | NNU_23619 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | LOC_Os07g07540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os07g07540 | 1 | ||
| Tree-based ortholog | 1-to-1 | LOC_Os07g07540 | 1 | ||
| Petunia axillaris | Orthologous gene family | 1-to-1 | Peaxi162Scf00036g00221 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Peaxi162Scf00036g00221 | 1 | ||
| Tree-based ortholog | 1-to-1 | Peaxi162Scf00036g00221 | 1 | ||
| Physcomitrium patens | Orthologous gene family | 1-to-many | Pp3c19_15590 Pp3c22_13930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pp3c19_15590 Pp3c22_13930 | 2 | ||
| Tree-based ortholog | 1-to-many | Pp3c19_15590 Pp3c22_13930 | 2 | ||
| Picea abies | Orthologous gene family | 1-to-1 | PAB00048095 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00048095 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | Potri.001G002700 Potri.003G222200 | 2 | |
| Anchor point | N/A | Potri.001G002700 Potri.003G222200 | 2 | ||
| Tree-based ortholog | 1-to-many | Potri.001G002700 Potri.003G222200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Potri.003G222200 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | Prupe.6G002700 | 1 | |
| Anchor point | N/A | Prupe.6G002700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Prupe.6G002700 | 1 | ||
| Tree-based ortholog | 1-to-1 | Prupe.6G002700 | 1 | ||
| Pyrus bretschneideri | Orthologous gene family | 1-to-many | Pbr000766.1.g Pbr030173.1.g | 2 | |
| Anchor point | N/A | Pbr000766.1.g Pbr030173.1.g | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Pbr000766.1.g Pbr030173.1.g | 2 | ||
| Tree-based ortholog | 1-to-many | Pbr000766.1.g Pbr030173.1.g | 2 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RCO.g.28842.000034 | 1 | |
| Anchor point | N/A | RCO.g.28842.000034 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RCO.g.28842.000034 | 1 | ||
| Tree-based ortholog | 1-to-1 | RCO.g.28842.000034 | 1 | ||
| Schrenkiella parvula | Orthologous gene family | 1-to-1 | Tp1g41090 | 1 | |
| Anchor point | N/A | Tp1g41090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Tp1g41090 | 1 | ||
| Tree-based ortholog | 1-to-1 | Tp1g41090 | 1 | ||
| Selaginella moellendorffii | Orthologous gene family | 1-to-many | SMO238G0020 SMO329G0030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SMO238G0020 SMO329G0030 | 2 | ||
| Tree-based ortholog | 1-to-many | SMO238G0020 SMO329G0030 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | Solyc01g005520.2 | 1 | |
| Anchor point | N/A | Solyc01g005520.2 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc01g005520.2 | 1 | ||
| Tree-based ortholog | 1-to-1 | Solyc01g005520.2 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | PGSC0003DMG400032122 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PGSC0003DMG400032122 | 1 | ||
| Tree-based ortholog | 1-to-1 | PGSC0003DMG400032122 | 1 | ||
| Tarenaya hassleriana | Orthologous gene family | 1-to-1 | THA.LOC104810318 | 1 | |
| Anchor point | N/A | THA.LOC104810318 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | THA.LOC104810318 | 1 | ||
| Tree-based ortholog | 1-to-1 | THA.LOC104810318 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TCA.TCM_039852 | 1 | |
| Anchor point | N/A | TCA.TCM_039852 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TCA.TCM_039852 | 1 | ||
| Tree-based ortholog | 1-to-1 | TCA.TCM_039852 | 1 | ||
| Trifolium pratense | Orthologous gene family | 1-to-1 | TPR.G6787 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TPR.G6787 | 1 | ||
| Tree-based ortholog | 1-to-1 | TPR.G6787 | 1 | ||
| Utricularia gibba | Orthologous gene family | 1-to-1 | UGI.Scf00047.4907 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | UGI.Scf00047.4907 | 1 | ||
| Tree-based ortholog | 1-to-1 | UGI.Scf00047.4907 | 1 | ||
| Vigna radiata var. radiata | Orthologous gene family | 1-to-1 | Vradi07g19380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Vradi07g19380 | 1 | ||
| Tree-based ortholog | 1-to-1 | Vradi07g19380 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | GSVIVG01025488001 | 1 | |
| Anchor point | N/A | GSVIVG01025488001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01025488001 | 1 | ||
| Tree-based ortholog | 1-to-1 | GSVIVG01025488001 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | Zm00001d018901 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zm00001d018901 | 1 | ||
| Tree-based ortholog | 1-to-1 | Zm00001d018901 | 1 | ||
| Ziziphus jujuba | Orthologous gene family | 1-to-1 | ZJU.LOC107415058 | 1 | |
| Anchor point | N/A | ZJU.LOC107415058 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZJU.LOC107415058 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZJU.LOC107415058 | 1 |